Publications

Every year, our UT HPC center contributes to the publication of dozens of research articles. Below you can see a list of publications where our computing resources have been used for research.

Currently we have 459 publication in our database.
  1. 2025 | Medical science

    A large-scale genome-wide association study on female genital tract polyps highlights role of DNA repair, cell proliferation, and cell growth.

    Pathare, Amruta D S; Džigurski, Jelisaveta; Pujol-Gualdo, Natàlia; Rukins, Valentina; Peters, Maire;… Mägi, Reedik; Salumets, Andres; Saare, Merli; Laisk, Triin (2025). Human Reproduction, 40 (4), 750-763. DOI: 10.1093/humrep/deaf025.

  2. 2025 | Medical science

    Y-mer: a k-mer based method for determining human Y chromosome haplogroups from ultra-low sequencing depth data.

    Puurand, Tarmo; Möls, Märt; Kaplinski, Lauris; Maal, Kadri; Krjutskov, Kaarel; Salumets, Andres; Kivisild, Toomas; & Remm, Maido (2025). Genome Biology 26, 243, DOI: 10.1186/s13059-025-03714-3.

  3. 2025 | Medical science

    Atlas of genetic and phenotypic associations across 42 female reproductive health diagnoses.

    Pujol Gualdo, Natàlia; Džigurski, Jelisaveta; Rukins, Valentina; Pajuste, Fanny-Dhelia; Wolford, Brooke N.; Võsa, Mariann; Golob, Mia; Haug, Lisette; Alver, Maris; Läll, Kristi; Peters, Maire; Brumpton, Ben M.; Metspalu, Andres; Milani, Lili; Esko, Tõnu; Nelis, Mari; Hudjashov, Georgi; Palta, Priit; Mägi, Reedik; Laisk, Triin (2025). Nature Medicine, 31, 1626-1634. DOI: 10.1038/s41591-025-03543-8.

  4. 2025 | Medical science

    Polygenic Risk Score Combined with Transcranial Sonography Refines Parkinson's Disease Risk Prediction.

    Kals, Mart; Reigo, Anu; Teder-Laving, Maris; Vaht, Mariliis; Nikopensius, Tiit; Metspalu, Andres; Toomsoo, Toomas (2025). Movement Disorders Clinical Practice, 12 (7), 928-937. DOI: 10.1002/mdc3.70011.

  5. 2025 | Medical science

    The Estonian Biobank's Journey from Biobanking to Personalized Medicine.

    Milani, Lili; Alver, Maris; Laur, Sven; Reisberg, Sulev; Haller, Toomas; Aasmets, Oliver; Abner, Erik; Alavere, Helene; Allik, Annely; Annilo, Tarmo; Fischer, Krista; Hofmeister, Robin; Hudjashov, Georgi; Jõeloo, Maarja; Kals, Mart; Karo-Astover, Liis; Kasela, Silva; Kolde, Anastassia; Krebs, Kristi; Krigul, Kertu Liis … Metspalu, Andres (2025). Nature Communications, 16, 3270. DOI: 10.1038/s41467-025-58465-3.

  6. 2025 | Medical science

    Genome-wide analyses identify 25 infertility loci and relationships with reproductive traits across the allele frequency spectrum.

    Venkatesh, Samvida S; Wittemans, Laura B L; Palmer, Duncan S; Baya, Nikolas A; Ferreira, Teresa; Hill, Barney; Lassen, Frederik Heymann; Parker, Melody J; Reibe, Saskia; Elhakeem, Ahmed; Banasik, Karina; Bruun, Mie T; Erikstrup, Christian; Aagard Jensen, Bitten; Juul, Anders; Mikkelsen, Christina; Nielsen, Henriette S; Ostrowski, Sisse R … Lindgren, Cecilia M. (2025). Nature Genetics, 57 (5), 1107-1118. DOI: 10.1038/s41588-025-02156-8.

  7. 2025 | Medical science

    Genetic influences on antidepressant side effects: a CYP2C19 gene variation and polygenic risk study in the Estonian Biobank.

    Kariis, Hanna Maria; Sarg, Dage; Krebs, Kristi; Joeloo, Maarja; Koiv, Kadri; Sirts, Kairit; Alver, Maris; Lehto, Kelli; Milani, Lili (2025). European Journal of Human Genetics, 1-10. DOI: 10.1038/s41431-025-01894-x.

  8. 2025 | Materials science

    Hydrogen and water interactions with CrMnFeCoNi alloy from density functional theory calculations.

    Qian, Yichen; Tamm, Artur; Cereceda, David; Kang, ShinYoung (2025). Computational Materials Science, 252, 113789. DOI: 10.1016/j.commatsci.2025.113789.

  9. 2025 | Medical science

    Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder.

    Strom, Nora I; Gerring, Zachary F; Galimberti, Marco; Yu, Dongmei; Halvorsen, Matthew W; Abdellaoui, Abdel; Rodriguez-Fontenla, Cristina; Sealock, Julia M; Bigdeli, Tim; Coleman, Jonathan R; Mahjani, Behrang; Thorp, Jackson G; Bey, Katharina; Burton, Christie L; Luykx, Jurjen J; Zai, Gwyneth; Alemany, Silvia … Mattheisen, Manuel (2025). Nature Genetics, 57 (6), 1389-1401. DOI: 10.1038/s41588-025-02189-z.

  10. 2025 | Medical science

    Characterization of prevalent genetic variants in the Estonian Biobank body-mass index GWAS.

    Abner, Erik, Batool, Kanwal; Taba, Nele; Nikopensius, Tiit; Läll, Kristi; Alekseienko, Anastasiia; Eriksson, Anders; Rämö, Joel; Haapaniemi, Hele; Kariis, Hanna M; Haljasmägi, Liis; Võsa, Urmo; Tillmann, Taavi; Vainik, Uku; Lehto, Kelli; Ollila, Hanna M; Kisand, Kai; Estonian Biobank Research; Esko, Tõnu (2025). Nature Communications, 16 (1), 8956. DOI: 10.1038/s41467-025-64006-9.

  11. 2025 | Medical science

    Parent-of-origin effects on complex traits in up to 236,781 individuals.

    Hofmeister, Robin J.; Cavinato, Theo; Karimi, Roya; van der Graaf, Adriaan; Pajuste, Fanny-Dhelia; Kronberg, Jaanika; Taba, Nele; Mägi, Reedik; Vaudel, Marc; Rubinacci, Simone; Johansson, Stefan; Milani, Lili; Delaneau, Olivier; Kutalik, Zoltan (2025). Nature, 1-17. DOI: 10.1038/s41586-025-09357-5.

  12. 2025 | Medical science

    Pleiotropic and sex-specific genetic mechanisms of circulating metabolic markers.

    van der Meer, Dennis; Rahman, Zillur; Ottas, Aigar; Parekh, Pravesh; Kutrolli, Gleda; Stinson, Sara E; Koromina, Maria; Rokicki, Jaroslav; Sonderby, Ida E; Parker, Nadine; Tesfaye, Markos; Hindley, Guy; Rodevand, Linn N; Koch, Elise; Steen, Nils Eiel; Berg, Jens Petter; O’Connell, Kevin S; Smeland, Olav B; Frei, Oleksandr … Andreassen, Ole A (2025). Nature Communications, 16 (1), ARTN 4961. DOI: 10.1038/s41467-025-60058-z.

  13. 2025 | Biology

    MR-link-2: pleiotropy robust cis Mendelian randomization validated in three independent reference datasets of causality.

    van der Graaf, Adriaan; Warmerdam, Robert; Auwerx, Chiandra; eQTLGen Consortium; Võsa, Urmo; Borges, Maria C; Franke, Lude; Kutalik, Zoltan (2025). Nature communications, 16(1), 6112. DOI:10.1038/s41467-025-60868-1.

  14. 2025 | NLP

    Paragraph-Level Machine Translation for Low-Resource Finno-Ugric Languages.

    Pashchenko, Dmytro; Yankovskaya, Lisa; Fishel, Mark (2025). Proceedings of the Joint 25th Nordic Conference on Computational Linguistics and 11th Baltic Conference on Human Language Technologies: NoDaLiDa/Baltic-HLT 2025, Tartu, Estonia, March 3-4, 2025. University of Tartu Library, 458-469. (NEALT Proceedings Series; 57).

  15. 2025 | NLP

    LLMs for Extremely Low-Resource Finno-Ugric Languages.

    Kuulmets, Hele-Andra; Purason, Taido; Fishel, Mark (2025). Findings of the Association for Computational Linguistics: NAACL 2025. Association for Computational Linguistics, 6677-6697. DOI: 10.18653/v1/2025.findings-naacl.373.

  16. 2025 | NLP

    How Well do LLMs know Finno-Ugric Languages? A Systematic Assessment.

    Kuulmets, Hele-Andra; Purason, Taido; Fishel, Mark (2025). Proceedings of the Joint 25th Nordic Conference on Computational Linguistics and 11th Baltic Conference on Human Language Technologies (NoDaLiDa/Baltic-HLT 2025). Ed. Richard Johansson, Sara Stymne. University of Tartu Library, 340-353.

  17. 2025 | Biology

    GAME: Genomic API for Model Evaluation.

    Luthra, Ishika; Priyadarshi, Satyam; Guo, Rui; Mahieu, Lukas; Kempynck, Niklas; Dooley, Damion; Penzar, Dmitry; Vorontsov, Ilya; Sheng, Yilun; Tu, Xinming; Klie, Adam; Drusinsky, Shiron; Floren, Alexander; Armand, Ethan; Alasoo, Kaur; Seelig, Georg; Tewhey, Ryan; Koo, Peter; Agarwal, Vikram; Gosai, Sager; … de Boer, Carl G (2025). bioRxiv, 2025.07.04.663250. DOI: 10.1101/2025.07.04.663250.

  18. 2025 | Biology

    ChromBPNet: bias factorized, base-resolution deep learning models of chromatin accessibility reveal cis-regulatory sequence syntax, transcription factor footprints and regulatory variants.

    Pampari, Anusri; Shcherbina, Anna; Kvon, Evgeny Z; Kosicki, Michael; Nair, Surag; Kundu, Soumya; Kathiria, Arwa S; Risca, Viviana I; Kuningas, Kristiina; Alasoo, Kaur; Greenleaf, William J; Pennacchio, Len A; Kundaje, Anshul (2025). bioRxiv, 2024.12.25.630221. DOI: 10.1101/2024.12.25.630221.

  19. 2025 | Biology

    Mendelian randomisation with proxy exposures: challenges and opportunities.

    Rahu, Ida; Tambets, Ralf; Fauman, Eric B; Alasoo, Kaur (2025). Genetics, iyaf210. DOI: 10.1093/genetics/iyaf210.

  20. 2025 | Medical science

    Trans-eQTL mapping prioritises USP18 as a negative regulator of interferon response at a lupus risk locus.

    Freimann, Krista; Brümmer, Anneke; Warmerdam, Robert; Rupall, Tarran S; Hernández-Ledesma, Ana Laura; Chiou Joshua; Holzinger, Emily R; Maranville, Joseph C; Nakic, Nikolina; Ongen, Halit; Stefanucci, Luca; Turchin, Michael C; eQTLGen Consortium; Franke, Lude; Võsa, Urmo; Jones, Carla P; Medina-Rivera, Alejandra; Trynka, Gosia; Kisand, Kai; Bergmann, Sven; Alasoo, Kaur (2025). Nature Communications, 6(1):8795. DOI: 10.1038/s41467-025-63856-7.

  21. 2025 | Biology

    Genome-wide association study for circulating metabolic traits in 619,372 individuals.

    Tambets, Ralf; Kronberg, Jaanika; van der Graaf, Adriaan; Jesse, Mihkel; Abner, Erik; Võsa, Urmo; Rahu, Ida; Taba, Nele; Kolde, Anastassia; Yarish, Dzvenymyra; Estonian Biobank Research Team; Fischer, Krista; Kutalik, Zoltan; Esko, Tõnu; Alasoo, Kaur; Palta, Priit (2025). medRxiv [Preprint], 2024.10.15.24315557. DOI: 10.1101/2024.10.15.24315557.

  22. 2025 | Computer science

    IAUNet: Instance-Aware U-Net.

    Prytula, Yaroslav; Tsiporenko, Illia; Zeynalli, Ali; Fishman, Dmytro (2025). In: 2025 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops (CVPRW), Nashville, TN, USA, 2025, pp. 4739-4748, DOI: 10.1109/CVPRW67362.2025.00460.

  23. 2025 | Biology

    Urbanization and genetic homogenization in the medieval Low Countries revealed through a ten-century paleogenomic study of the city of Sint-Truiden.

    Beneker, Owyn; Molinaro, Ludovica; Guellil, Meriam; Sasso, Stefania; Kabral, Helja; Bonucci, Biancamaria; Gaens, Noah; D’Atanasio, Eugenia; Mezzavilla, Massimo; Delbrassine, Helios; Braet, Linde; Lambert, Bart; Deckers, Pieterjan; Biagini, Simone Andrea; Hui, Ruoyun; Becelaere, Sara; Geypen, Jan; Hoebreckx, Maxim; Berk, Birgit; Driesen, Petra … Kivisild, Toomas (2025). Genome Biology, 26 (127), 1-42. DOI: 10.1186/s13059-025-03580-z.

  1. 2024 | Biology

    Extensive co-regulation of neighboring genes complicates the use of eQTLs in target gene prioritization.

    Tambets, Ralf; Kolde, Anastassia; Kolberg, Peep, Love, Michael I; Alasoo, Kaur (2024). HGG Advances, 5(4):100348. DOI: 10.1016/j.xhgg.2024.100348.

  2. 2024 | Bioinformatics

    Interpreting artificial neural networks to detect genome-wide association signals for complex traits.

    Yelmen, Burak; Alver, Maris; Güler, Merve Nur; Jay, Flora; Milani, Lili (2024). arXiv preprint arXiv:2407.18811

  3. 2024 | Medical science

    Ancestral genetic components are consistently associated with the complex trait landscape in European biobanks.

    Pankratov, Vasili; Mezzavilla, Massimo; Aneli, Serena; Kuznetsov, Ivan A; Fusco, Daniela; Wilson, James F; Metspalu, Mait; Provero, Paolo; Pagani, Luca; Marnetto, Davide (2024). European Journal of Human Genetics, 32 (11), 1492-1499. DOI: 10.1038/s41431-024-01678-9.

  4. 2024 | Computer science

    Comparative Analysis of Pretrained Audio Representations in Music Recommender Systems.

    Tamm, Yan-Martin; Aljanaki, Anna (2024). 18th ACM Conference on Recommender Systems. ACM, 934-938. DOI: 10.1145/3640457.3688172.

  5. 2024 | Biology

    The genomic portrait of the Picene culture provides new insights into the Italic Iron Age and the legacy of the Roman Empire in Central Italy.

    Ravasini, Francesco; Kabral, Helja; Solnik, Anu; de Gennaro, Luciana; Montinaro, Francesco; Hui, Ruoyun; Delpino, Chiara; Finocchi, Stefano; Giroldini, Pierluigi; Mei, Oscar; Beck De Lotto, Michael A; Cilli, Elisabetta; Hajiesmaeil, Mogge; Pistacchia, Letizia; Risi, Flavia; Giacometti, Chiara; Scheib, Christiana L; Tambets, Kristiina; Metspalu, Mait … Trombetta, B. (2024). Genome biology, 25(1), 292. DOI: 10.1186/s13059-024-03430-4

  6. 2024 | Medical science

    Predicted mechanistic impacts of human protein missense variants.

    Jänes, Jürgen; Müller, Marc; Selvaraj, Senthil; Manoel, Diogo; Stephenson, James; Gonçalves, Catarina; Lafita, Aleix; Polacco, Benjamin; Obernier, Kirsten; Alasoo, Kaur; Lemos, Manuel C; Krogan, Nevan; Martin, Maria; Saraiva, Luis R; Burke, David; Beltrao, Pedro (2024). bioRxiv [Preprint], 2024.05.29.596373. DOI: 10.1101/2024.05.29.596373.

  7. 2024 | Biology

    EUKARYOME: the rRNA gene reference database for identification of all eukaryotes.

    Tedersoo,Leho; Moghaddam, Mahdieh S Hosseyni; Mikryukov, Vladimir; Hakimzadeh, Ali; Bahram, Mohammad; Nilsson, R Henrik; Yatsiuk, Iryna; Geisen, Stefan; Schwelm, Arne; Piwosz, Kasia; Prous, Marko; Sildever, Sirje; Chmolowska, Dominika; Rueckert, Sonja; Skaloud, Pavel; Laas, Peeter; Tines, Marco; Jung, Jae-Ho; Choi, Ji Hye … Anslan, Sten (2024). Database, 2024 (baae043). DOI: 10.1093/database/baae043.

  8. 2024 | NLP

    No Error Left Behind: Multilingual Grammatical Error Correction with Pre-trained Translation Models

    Luhtaru, Agnes; Korotkova, Elizaveta; Fishel, Mark (2024). In: Proceedings of the 18th Conference of the European Chapter of the Association for Computational Linguistics. (1209-1222). Malta: ACL Anthology.

  9. 2024 | Computer science

    AutoMLBench: A comprehensive experimental evaluation of automated machine learning frameworks.

    Eldeeb, Hassan; Maher, Mohamed; Elshawi, Radwa; Sakr, Sherif (2024). Expert Systems with Applications, 243, ARTN 122877. DOI: 10.1016/j.eswa.2023.122877.

  10. 2024 | Chemistry

    Layered Heterostructure of Graphene and TiO2 as a Highly Sensitive and Stable Photoassisted NO2 Sensor.

    Berholts, Artjom; Kodu, Margus; Rubin, Pavel; Kahro, Tauno; Alles, Harry; Jaaniso, Raivo (2024). ACS Applied Materials & Interfaces, 16 (33), 43827-43837. DOI: 10.1021/acsami.4c08151.

  11. 2024 | Computer science

    Evaluation of Trajectory Distribution Predictions with Energy Score.

    Shahroudi, Novin; Lepson, Mihkel; Kull, Meelis (2024). In: Proceedings of the 41st International Conference on Machine Learning (ICML 2024). (44322-44341). PMLR. (Proceedings of Machine Learning Research; 235).

  12. 2024 | Computer science

    Going Beyond U-Net: Assessing Vision Transformers for Semantic Segmentation in Microscopy Image Analysis.

    Tsiporenko, Illia; Chizhov, Pavel; Fishman, Dmytro (2024). Springer Science+Business Media. DOI: 10.48550/arXiv.2409.16940.

  13. 2024 | NLP

    To Err Is Human, but Llamas Can Learn It Too.

    Luhtaru, Agnes; Purason, Taido; Vainikko, Martin; Del, Maksym; Fishel, Mark (2024). In: Findings of the Association for Computational Linguistics: EMNLP 2024. (12466-12481). Association for Computational Linguistics. DOI: 10.18653/v1/2024.findings-emnlp.727.

  14. 2024 | NLP

    Mixing and Matching: Combining Independently Trained Translation Model Components.

    Purason, Taido; Tättar, Andre; Fishel, Mark (2024). Proceedings of the 1st Workshop on Modular and Open Multilingual NLP (MOOMIN 2024: St Julians, Malta, March 21, 2024. Ed. Raúl Vázquez, Timothee Mickus, Jörg Tiedemann, Ivan Vulić, Ahmet Üstün. Association for Computational Linguistics, 44-56.

  15. 2024 | NLP

    Teaching Llama a New Language Through Cross-Lingual Knowledge Transfer.

    Kuulmets, Hele-Andra; Purason, Taido; Luhtaru, Agnes; Fishel, Mark (2024). Findings of the Association for Computational Linguistics: NAACL 2024. Association for Computational Linguistics, 3309-3325. DOI: 10.18653/v1/2024.findings-naacl.210.

  16. 2024 | NLP

    Enabling Conversational Speech Synthesis using Noisy Spontaneous Data.

    Rätsep, Liisa; Lellep, Rasmus; Fishel, Mark (2024). In: Proc. Interspeech 2024. (4923-4927). ISCA. DOI: 10.21437/Interspeech.2024-2403.

  17. 2024 | NLP

    Multilinguality or Back-translation? A Case Study with Estonian.

    Korotkova, Elizaveta; Purason, Taido; Luhtaru, Agnes; Fišel, Mark (2024). In: Nicoletta Calzolari, etc. (Ed.). Proceedings of the 2024 Joint International Conference on Computational Linguistics, Language Resources and Evaluation (LREC-COLING 2024). (11838-11848). Turin, Italy: ELRA Language Resources Association (ELRA).

  18. 2024 | NLP

    Estonian-Centric Machine Translation: Data, Models, and Challenges.

    Korotkova, Elizaveta; Fišel, Mark (2024). In: Carolina Scarton, etc. (Ed.). Proceedings of the 25th Annual Conference of the European Association for Machine Translation. (647-660). Sheffield, United Kingdom: ACL Anthology.

  19. 2024 | NLP

    Adapting Audiovisual Speech Synthesis to Estonian.

    Aller, Sven; Fishel, Mark (2024). Text, Speech, And Dialogue, Tsd 2024, Pt Ii: 27th International Conference on Text, Speech, and Dialogue (TSD), SEP 09-13, 2024, Brno, CZECH REPUBLIC. Ed. Noth, E.; Horak, A.; Sojka, P. Cham: Springer International Publishing Ag, 13-23. DOI: 10.1007/978-3-031-70566-3_2.

  20. 2024 | Medical science

    Genetic determinants of plasma protein levels in the Estonian population.

    Kalnapenkis, Anna; Jõeloo, Maarja; Lepik, Kaido; Kukuškina, Viktorija; Kals, Mart; Alasoo, Kaur; Estonian Biobank Research Team; Mägi, Reedik; Esko, Tõnu; Võsa, Urmo (2024). Scientific reports, 14(1), 7694. DOI: 10.1038/s41598-024-57966-3.

  21. 2024 | Medical science

    Distinct and shared genetic architectures of gestational diabetes mellitus and type 2 diabetes.

    Elliott, Amanda; Walters, Raymond K; Pirinen, Matti; Kurki, Mitja; Junna, Nella; Goldstein, Jacqueline I; Reeve, Mary Pat; Siirtola, Harri; Lemmelä, Susanna M; Turley, Patrick; Lahtela, Elisa; Mehtonen, Juha; Reis, Kadri; Elnahas, Abdelrahman G; Reigo, Anu; Palta, Priit; Esko, Tõnu; Mägi, Reedik … Widén, Elisabeth (2024). Nature Genetics, 56 (3), 377-382. DOI: 10.1038/s41588-023-01607-4.

  22. 2024 | Medical science

    Genetic drivers and cellular selection of female mosaic X chromosome loss.

    Liu, Aoxing; Genovese, Giulio; Zhao, Yajie; Pirinen, Matti; Zekavat, Seyedeh M; Kentistou, Katherine A; Yang, Zhiyu; Yu, Kai; Vlasschaert, Caitlyn; Liu, Xiaoxi; Brown, Derek W; Hudjashov, Georgi; Gorman, Bryan R; Dennis, Joe; Zhou, Weiyin; Momozawa, Yukihide; Pyarajan, Saiju; Tuzov, Valdislav; Pajuste, Fanny-Dhelia; Aavikko, Mervi … Machiela, Mitchell J (2024). Nature 631, 134-141. DOI: 10.1038/s41586-024-07533-7.

  23. 2024 | Medical science

    Body mass index stratified meta-analysis of genome-wide association studies of polycystic ovary syndrome in women of European ancestry.

    Burns, Kharis; Mullin, Benjamin H; Moolhuijsen, Loes M E; Laisk, Triin; Tyrmi, Jaakko S; Cui, Jinrui; Actkins, Ky’Era V; Louwers, Yvonne V; Estonian Biobank Research Team; Davis, Lea K; Dudbridge, Frank; Azziz, Ricardo; Goodarzi, Mark O; Laivuori, Hannele; Mägi, Reedik; Visser, Jenny A; Laven, Joop S E; Wilson, Scott G … Stuckey, Bronwyn G A (2024). BMC Genomics, 25 (1), 1-15. DOI: 10.1186/s12864-024-09990-w.

  24. 2024 | Medical science

    Socio-demographic and genetic risk factors for drug adherence and persistence across 5 common medication classes.

    Cordioli, Mattia; Corbetta, Andrea; Kariis, Hanna Maria; Jukarainen, Sakari; Vartiainen, Pekka; Kiiskinen, Tuomo; Ferro, Matteo; Finngen; Estonian Biobank Research Team; Perola, Markus; Niemi, Mikko; Ripatti, Samuli; Lehto, Kelli; Milani, Lili; Ganna, Andrea (2024). Nature Communications, 15 (1), 9156. DOI: 10.1038/s41467-024-53556-z.

  25. 2024 | Medical science

    Genome-wide meta-analysis conducted in three large biobanks expands the genetic landscape of lumbar disc herniations.

    Salo, Ville; Määttä, Juhani; Sliz, Eeva; Palotie, Aarno; Daly, Mark; Riley-Gills, Bridget; Jacob, Howard; Paul, Dirk; Petrovski, Slavé; Runz, Heiko; John, Sally; Okafo, George; Lawless, Nathan; Salminen-Mankonen, Heli; Plenge, Robert; Maranville, Joseph; McCarthy, Mark; Ehm, Margaret G; Auro, Kirsi; Longerich, Simonne … Kettunen, Johannes (2024). Nature Communications, 15 (1), 9424. DOI: 10.1038/s41467-024-53467-z.

  26. 2024 | Medical science

    Characterising the genetic architecture of changes in adiposity during adulthood using electronic health records.

    Venkatesh, Samvida S; Ganjgahi, Habib; Palmer, Duncan S; Coley, Kayesha; Linchangco Jr, Gregorio V; Hui, Qin; Wilson, Peter; Ho, Yuk-Lam; Cho, Kelly; Arumae, Kadri; Million Veteran Program, Estonian Biobank Research Team; Wittemans, Laura B L; Nellaker, Christoffer; Vainik, Uku; Sun, Yan V; Holmes, Chris; Lindgren, Cecilia M; Nicholson, George (2024). Nature Communications, 15 (1), ARTN 5801. DOI: 10.1038/s41467-024-49998-0.

  27. 2024 | Medical science

    Use of Estonian Biobank data and participant recall to improve Wilson's disease management.

    Nurm, Miriam; Reigo, Anu; Annilo, Tarmo; Toomsoo, Toomas; Nõukas, Margit; Nikopensius, Tiit; Pankratov, Vasili; Reisberg, Tuuli; Hudjashov, Georgi; Estonian Biobank Research Team; Haller, Toomas; Tõnisson, Neeme (2024). European Journal of Human Genetics, 12, 1-10. DOI: 10.1038/s41431-024-01767-9.

  28. 2024 | Medical science

    Leveraging large-scale multi-omics evidences to identify therapeutic targets from genome-wide association studies.

    Lessard, Samuel; Chao, Michael; Reis, Kadri; FinnGen; Estonian Biobank Research Team; Beauvais, Mathieu; Rajpal, Deepak K; Sloane, Jennifer; Palta, Priit; Klinger, Katherine; de Rinaldis, Emanuele; Shameer, Khader; Chatelain, Clement (2024). BMC Genomics, 25 (1), ARTN 1111. DOI: 10.1186/s12864-024-10971-2.

  29. 2024 | Medical science

    Identifying Atopic Dermatitis Risk Loci in 1,094,060 Individuals with Subanalysis of Disease Severity and Onset.

    Pasanen, Anu; Sliz, Eeva; Huilaja, Laura; FinnGen; Estonian Biobank Research Team; Reimann, Ene; Mägi, Reedik; Laisk, Triin; Tasanen, Kaisa; Kettunen, Johannes (2024). Journal of Investigative Dermatology, 144 (11), 2417-2425. DOI: 10.1016/j.jid.2024.02.036.

  30. 2024 | Medical science

    Positive selection in the genomes of two Papua New Guinean populations at distinct altitude levels.

    André, Mathilde; Brucato, Nicolas; Hudjasov, Georgi; Pankratov, Vasili; Yermakovich, Danat; Montinaro, Francesco; Kreevan, Rita; Kariwiga, Jason; Muke, John; Boland, Anne; Deleuze, Jean-François; Meyer, Vincent; Evans, Nicholas; Cox, Murray P; Leavesley, Matthew; Dannemann, Michael; Org, Tõnis; Metspalu, Mait; Mondal, Mayukh; Ricaut, François-Xavier (2024). Nature Communications, 15 (1), 3352. DOI: 10.1038/s41467-024-47735-1.

  31. 2024 | Medical science

    Gene pool preservation across time and space In Mongolian-speaking Oirats.

    Balinova, Natalia; Hudjašov, Georgi; Pankratov, Vasili; Pennarun, Erwan; Reidla, Maere; Metspalu, Ene; Batyrov, Valery; Khomyakova, Irina; Reisberg, Tuuli; Parik, Jüri; Dzhaubermezov, Murat; Aiyzhy, Elena; Balinova, Altana; El’chinova, Galina; Spitsyna, Nailya; Khusnutdinova, Elza; Metspalu, Mait; Tambets, Kristiina; Villems, Richard; Kushniarevich, Alena (2024). European Journal of Human Genetics, 32, 1150-1158. DOI: 10.1038/s41431-024-01588-w.

  32. 2024 | Medical science

    Evaluation of polygenic scoring methods in five biobanks shows larger variation between biobanks than methods and finds benefits of ensemble learning.

    Monti, Remo; Eick, Lisa; Hudjashov, Georgi; Läll, Kristi; Kanoni, Stavroula; Wolford, Brooke N; Wingfield, Benjamin; Pain, Oliver; Wharrie, Sophie; Jermy, Bradley; McMahon, Aoife; Hartonen, Tuomo; Heyne, Henrike; Mars, Nina; Lambert, Samuel; Genes and Health Research Team; Hveem, Kristian; Inouye, Michael; van Heel, David A; Mägi, Reedik … Lippert, Christoph (2024). The American Journal of Human Genetics, 111 (7), 1431-1447. DOI: 10.1016/j.ajhg.2024.06.003.

  33. 2024 | Biology

    READv2: advanced and user-friendly detection of biological relatedness in archaeogenomics.

    Alacamli, Erkin; Naidoo, Thijessen; Guler, Merve N.; Saglican, Ekin; Akturk, Sevval; Mapelli, Igor; Vural, Kivilcim Basak; Somel, Mehmet; Malmstrom, Helena; Gunther, Torsten (2024). Genome Biology, 25 (1), ARTN 216. DOI: 10.1186/s13059-024-03350-3.

  34. 2024 | Biology

    2500 Years of Human Betaherpesvirus 6A and 6B Evolution Revealed by Ancient DNA.

    Guellil, Meriam; van Dorp, Lucy; Saag, Lehti; Beneker, Owyn; Bonucci, Biancamaria; Sasso, Stefania; Saupe, Tina; Solnik, Anu; Kabral, Helja; Allmäe, Raili; Bates, Jessica; Dittmar, Jenna M; Ge, Xiangyu Jack; Inskip, Sarah; Jonuks, Tõnno; Karmanov, Victor N., Khartanovich, Valeri I, Larmuseau, Maarten H D; Aneli, Serena; Cessford, Craig; Kriiska, Aivar; Mägi, Marika … Tambets Kristiina (2024). In: bioRxiv, 2024.06.25.599715. DOI: 10.1101/2024.06.25.599715.

  35. 2024 | Biology

    Low Genetic Impact of the Roman Occupation of Britain in Rural Communities.

    Scheib, Christiana L; Hui, Ruoyun; Rose, Alice K; D’Atanasio, Eugenia; Inskip, Sarah A; Dittmar, Jenna; Cessford, Craig; Griffith, Samuel J; Solnik, Anu; Wiseman, Rob; Neil, Benjamin; Biers, Trish; Harknett, Sarah-Jane; Sasso, Stefania; Biagini, Simone A; Runfeldt, Goran; Duhig, Corinne; Evans, Christopher; Metspalu, Mait; Millett, Martin J … Kivisild, Toomas (2024). Molecular Biology and Evolution, 41 (9), ARTN msae168. DOI: 10.1093/molbev/msae168.

  36. 2024 | Biology

    Capturing the fusion of two ancestries and kinship structures in Merovingian Flanders.

    Sasso, Stefania; Saag, Lehti; Spros, Rachèl; Beneker, Owyn; Molinaro, Ludovica; Biagini, Simone A; Lehouck, Alexander; Van De Vijver, Katrien; Hui, Ruoyun; d’Atanasio, Eugenia; Kushniarevich, Alena; Kabral, Helja; Metspalu, Ene; Guellil, Meriam; Ali, Muhammad Q A; Geypen, Jan; Hoebreckx, Maxim; Berk, Birgit; de Winter, Natasja … Kivisild, Toomas (2024). Proceedings of The National Academy of Sciences of The United States of America, 121 (27), e2406734121. DOI: 10.1073/pnas.2406734121.

  37. 2024 | Medical science

    Genetic history of Cambridgeshire before and after the Black Death.

    Hui, Ruoyun; Scheib, Christiana L; D’Atanasio, Eugenia; Inskip, Sarah A; Cessford, Craig; Biagini, Simone A; Wohns, Anthony W; Ali, Muhammad Q A; Griffith, Samuel J; Solnik, Anu; Niinemäe, Helja; Ge, Xiangyu Jack; Rose, Alice K; Beneker, Owyn; O’Connell, Tamsin C; Robb, John E; Kivisild, Toomas (2024). Science Advances, 10 (3), eadi5903. DOI: 10.1126/sciadv.adi5903.

  38. 2024 | Biology

    Transcriptome analysis reveals involvement of thiopurine S-methyltransferase in oxidation-reduction processes.

    Šmid, Alenka; Štajdohar, Miha; Milek, Miha; Urbančič, Dunja; Karas Kuželički, Nataša; Tamm, Riin; Metspalu, Andres; Mlinarič-Raščan, Irena (2024). European Journal of Pharmaceutical Sciences, 192, 106616. DOI: 10.1016/j.ejps.2023.106616.

  1. 2023 | Medical science

    Pre-vaccination prevalence of type-specific human papilloma virus infection by grade of cervical cytology in Estonia.

    Uusküla, Anneli; Oja, Marek; Tamm, Sirli; Tisler, Anna; Laanpere, Made; Padrik, Lee; Nygard, Mari; Reisberg, Sulev; Vilo, Jaak; Kolde, Raivo (2023). JAMA Network Open, 6 (2). DOI: 10.1001/jamanetworkopen.2022.54075.

  2. 2023 | Physics

    Laser-based analytical techniques in cultural heritage science - Tutorial review.

    Vahur, Signe; Treshchalov, Alexey; Lohmus, Rynno; Teearu, Anu; Niman, Käthi; Hiiop, Hilkka; Kikas, Jaak; Leito, Ivo (2023). Analytica Chimica Acta, 342107. DOI: 10.1016/j.aca.2023.342107.

  3. 2023 | Chemistry

    Modelling of Chirogenesis. Best Practices and Applications.

    Burk, Peeter; Burk, Jaanus (2023). In: Victor Borovkov, Riina Aav (Ed.). Chirogenesis in Chemical Science, pages 429−465. New Jersey: World Scientific. DOI: 10.1142/9789811259227_0008.

  4. 2023 | Biology

    The genomic echoes of the last Green Sahara on the Fulani and Sahelian people.

    D’Atanasio, Eugenia; Risi, Flavia; Ravasini, Francesco; Montinaro, Francesco; Hajiesmaeil, Mogge; Bonucci, Biancamaria; Pistacchia, Letizia; Amoako-Sakyi, Daniel; Bonito, Maria; Onidi, Sara; Colombo, Giulia; Semino, Ornella; Destro Bisol, Giovanni; Anagnostou, Paolo; Metspalu, Mait; Tambets, Kristiina; Trombetta, Beniamino; Cruciani, Fulvio (2023). Current Biology, 33 (24). DOI: 10.1016/j.cub.2023.10.075.

  5. 2023 | Chemistry

    Comparison of two azobenzene-based amino acid derivatization reagents for LC- MS/MS analysis in positive and negative ESI modes.

    Flores, Ernesto de Jesus Zapata; Bui, Nguyen Kim Ngan; Selberg, Sigrid; Herodes, Koit; Leito, Ivo (2023). Talanta, 252, 123803. DOI: 10.1016/j.talanta.2022.123803.

  6. 2023 | Chemistry

    Solubility of Mono-Aminoacridines.

    Ghiami-Shomami, Ali; Tshepelevitsh, Sofja; Tammekivi, Eliise; Ilisson, Mihkel; Mastitski, Anton; Kütt, Agnes; Toom, Lauri; Leito, Ivo (2023). ChemistrySelect, 8 (29), e202300835. DOI: 10.1002/slct.202300835.

  7. 2023 | Medical science

    Nationwide health, socio-economic and genetic predictors of COVID-19 vaccination status in Finland.

    Hartonen, Tuomo; Jermy, Bradley; Sõnajalg, Hanna; Vartiainen, Pekka; Krebs, Kristi; Vabalas, Andrius; FinnGen; Estonian Biobank Research Team; Leino, Tuija; Nohynek, Hanna; Sivelä, Jonas; Mägi, Reedik; Daly, Mark; Ollila, Hanna M; Milani, Lili; Perola, Markus; Ripatti, Samuli; Ganna, Andrea (2023). Nature Human Behaviour, 7 (7). DOI: 10.1038/s41562-023-01591-z.

  8. 2023 | Medical science

    Precise, Genotype-First Breast Cancer Prevention: Experience With Transferring Monogenic Findings From a Population Biobank to the Clinical Setting.

    Jurgens, Hannes; Roht, Laura; Leitsalu, Liis; Noukas, Margit; Palover, Marili; Nikopensius, Tiit; Reigo, Anu; Kals, Mart; Kallak, Kersti; Kutner, Riina; Valvere, Vahur; Laidre, Piret; Toome, Kadri; Rekker, Kadri; Tooming, Mikk; Murumets, Ulle; Kahre, Tiina; Kruuv-Kao, Krista; Ounap, Katrin; Padrik, Peeter … Tonisson, Neeme (2023). Frontiers in Genetics, 13, 881100. DOI: 10.3389/fgene.2022.881100

  9. 2023 | Chemistry

    Ab Initio Calculation of Thermodynamic Functions for CO2 Adsorption in Metal-Organic Frameworks: Entropic Effects of Lateral Interactions.

    Koppel, Ivar, Kaido Sillar (2023). The Journal of Physical Chemistry C, 127 (24), 11712−11719. DOI: 10.1021/acs.jpcc.3c02234.

  10. 2023 | NLP

    Distilling Estonian Text Domains for Production- Oriented Machine Translation.

    Korotkova, Elizaveta; Fishel, Mark (2023). In: Proceedings of the 24th Nordic Conference on Computational Linguistics, pages 772−781. ACL Anthology.

  11. 2023 | Medical science

    Common clinical blood and urine biomarkers for ischemic stroke: an Estonian Electronic Health Records database study.

    Kurvits, Siim; Harro, Ainika; Reigo, Anu; Ott, Anne; Laur, Sven; Särg, Dage; Tampuu, Ardi; Alasoo, Kaur; Vilo, Jaak; Milani, Lili; Haller, Toomas (2023). European Journal of Medical Research, 28 (1), 133. DOI: 10.1186/s40001-023-01087-6.

  12. 2023 | NLP

    Translated Benchmarks Can Be Misleading: the Case of Estonian Question Answering.

    Kuulmets, Hele-Andra; Fishel, Mark (2023). In: Proceedings of the 24th Nordic Conference on Computational Linguistics (NoDaLiDa), pages 710−716. Torshavn, Faroe Islands. University of Tartu Library.

  13. 2023 | NLP

    Eesti keele õigekirja- ja grammatikakontroll: mudelite võrdlus ja kombineerimine.

    Luhtaru, Agnes; Fišel, Mark; Liin, Krista; Allkivi-Metsoja, Kais; Kippar, Jaagup (2023). 20th Annual Conference of Applied Linguistics, pages 16−18. Eesti Rakenduslingvistika Ühing.

  14. 2023 | NLP

    Automatic Transcription for Estonian Children’s Speech.

    Luhtaru, Agnes; Jaaska, Rauno; Kruusamäe, Karl; Fishel, Mark (2023). In: Proceedings of the 24th Nordic Conference on Computational Linguistics (NoDaLiDa), pages 705−709. Torshavn, Faroe Islands. University of Tartu Library.

  15. 2023 | Medical science

    From phenotype to endotype: preclinical validation of ROS-cGMPopathies in the Estonian Biobank.

    Nogales, Cristian; Kronberg, Jaanika; Petraina, Alexandra; Pachado, Mayra Pacheco; Weerts, Jerremy; Aizpurua, Arantxa Barandiaran; van Empel, Vanessa; Nelis, Mari; Milani, Lili; Esko, Tonu; Metspalu, Andres; Magi, Reedik; Schmidt, Harald H. H. W. (2023). Journal of Translational Medicine, 21 (Suppl 1). DOI: 10.1186/s12967-022-03800-1

  16. 2023 | Medical science

    Untargeted metabolomics profiling in pediatric patients and adult populations indicates a connection between lipid imbalance and epilepsy.

    Oja, Kaisa T; Ilisson, Mihkel; Reinson, Karit; Muru, Kai; Reimand, Tiia; Peterson, Hedi; Fishman, Dmytro; Esko, Tõnu; Haller, Toomas; Kronberg, Jaanika; Wojcik, Monica H; Kennedy, Adam; Michelotti, Gregory; O’Donnell-Luria, Anne; Õiglane-Šlik, Eve; Pajusalu, Sander; Õunap, Katrin (2023). medRxiv. Preprint. DOI: 10.1101/2023.03.29.23287640.

  17. 2023 | Medical science

    Transforming Estonian health data to the Observational Medical Outcomes Partnership (OMOP) Common Data Model: lessons learned.

    Oja, Marek; Tamm, Sirli; Mooses, Kerli; Pajusalu, Maarja; Talvik, Harry-Anton; Ott, Anne; Laht, Marianna; Malk, Maria; Lõo, Marcus; Holm, Johannes; Haug, Markus; Šuvalov, Hendrik; Särg, Dage; Vilo, Jaak; Laur, Sven; Kolde, Raivo; Reisberg, Sulev (2023). JAMIA Open, 6 (4), ooad100. DOI: 10.1093/jamiaopen/ooad100.

  18. 2023 | Chemistry

    Tris(benzophenoneimino)phosphane and Related Compounds.

    Pikma, Marta-Lisette; Lõkov, Märt; Tshepelevitsh, Sofja; Saame, Jaan; Haljasorg, Tõiv; Toom, Lauri; Selberg, Sigrid; Leito, Ivo; Kütt, Agnes (2023). European Journal of Organic Chemistry, 26 (28), e202300453. DOI: 10.1002/ejoc.202300453.

  19. 2023 | Computer science

    Metadata Improves Segmentation Through Multitasking Elicitation.

    Plutenko, Iaroslav; Papkov, Mikhail; Palo, Kaupo; Parts, Leopold; Fishman, Dmytro (2023). In: Domain Adaptation and Representation Transfer, pages 147-155. DOI: 10.48550/arXiv.2308.09411.

  20. 2023 | Chemistry

    The Unified Redox Scale for All Solvents: Consistency and Gibbs Transfer Energies of Electrolytes from their Constituent Single Ions.

    Radtke, Valentin; Priester, Denis; Heering, Agnes; Mueller, Carina; Koslowski, Thorsten; Leito, Ivo; Krossing, Ingo (2023). Chemistry, 29, e202300609. DOI: 10.1002/chem.202300609.

  21. 2023 | Medical science

    Endometrial cancer diagnostic and prognostic algorithms based on proteomics, metabolomics, and clinical data: a systematic review.

    Romano, Andrea; Rižner, Tea L; Werner, Henrica M J; Semczuk, Andrzej; Lowy, Camille; Schröder, Christoph; Griesbeck, Anne; Adamski, Jerzy; Fishman, Dmytro; Tokarz, Janina (2023). Frontiers in Oncology, 13, 1120178. DOI: 10.3389/fonc.2023.1120178.

  22. 2023 | Medical science

    Kroonilise neeruhaiguse levimus Eesti e-tervise andmete alusel.

    Rosenberg, Mai; Thetloff, Maie; Tamm, Sirli; Kuusk, Krista; Reisberg, Sulev; Vilo, Jaak (2023). Eesti Arst, 102 (5), 263−276.

  23. 2023 | Medical science

    Overlap of Genetic Loci for Central Serous Chorioretinopathy With Age-Related Macular Degeneration.

    Rämö, Joel T; Abner, Erik; van Dijk, Elon H C; Wang, Xin; Brinks, Joost; Nikopensius, Tiit; Nõukas, Margit; Marjonen, Heidi; Silander, Kaisa; Jukarainen, Sakari; Kiiskinen, Tuomo; Choi, Seung Hoan; Kajanne, Risto; Mehtonen, Juha; Palta, Priit; Lubitz, Steven A; Kaarniranta, Kai; Sobrin, Lucia; Kurki, Mitja; Yzer, Suzanne … (2023). JAMA Ophthalmology, 141 (7), 697. DOI: 10.1001/jamaophthalmol.2023.0706.

  24. 2023 | NLP

    Neural Text-to-Speech Synthesis for Võro.

    Rätsep, Liisa; Fishel, Mark (2023). In: Proceedings of the 24th Nordic Conference on Computational Linguistics (NoDaLiDa), pages 723−727. Torshavn, Faroe Islands. University of Tartu Library.

  25. 2023 | Medical science

    Genetics of circulating inflammatory proteins identifies drivers of immune-mediated disease risk and therapeutic targets.

    Zhao, Jing Hua; Stacey, David; Eriksson, Niclas; Macdonald-Dunlop, Erin; Hedman, Åsa K; Kalnapenkis, Anette; Enroth, Stefan; Cozzetto, Domenico; Digby-Bell, Jonathan; Marten, Jonathan; Folkersen, Lasse; Herder, Christian; Jonsson, Lina; Bergen, Sarah E; Gieger, Christian; Needham, Elise J; Surendran, Praveen; Metspalu, Andres; Milani, Lili; Mägi, Reedik … (2023). Nature Immunology, 24, 1540−1551. DOI: s41590-023-01588-w.

  26. 2023 | Chemistry

    Theoretical Study on Fluorinated Derivatives of Sulfolane, Cyclopentanone, and Gamma-Butyrolactone.

    Tshepelevitsh, Sofja, Kütt, Agnes; Leito, Ivo (2023). Molecules, 28 (23). DOI: 10.3390/molecules28237770.

  27. 2023 | Earth science

    Modeling forest landscape futures: Full scale simulation of realistic socioeconomic scenarios in Estonia.

    Kaasik, Ants; Kont, Raido; Lõhmus, Asko (2023). PLoS One. 2023, 18, (11), e0294650. DOI: 10.1371/journal.pone.0294650.

  28. 2023 | Chemistry

    NMR shift prediction from small data quantities.

    Rull, Herman; Fischer, Markus; Kuhn, Stefan (2023). J Cheminform, 15 (1). DOI: 10.1186/s13321-023-00785-x.

  29. 2023 | Biology

    eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs.

    Kerimov, Nurlan; Tambets, Ralf; Hayhurst, James D; Rahu, Ida; Kolberg, Peep; Raudvere, Uku; Kuzmin, Ivan; Chowdhary, Anshika; Vija, Andreas; Teras, Hans J; Kanai, Masahiro; Ulirsch, Jacob; Ryten, Mina; Hardy, John; Guelfi, Sebastian; Trabzuni, Daniah; Kim-Hellmuth, Sarah; Rayner, William; Finucane, Hilary; Peterson, Hedi; Mosaku, Abayomi; Parkinson, Helen; Alasoo, Kaur (2023). PLoS Genet, 19, (9), e1010932. DOI: 10.1371/journal.pgen.1010932.

  30. 2023 | Medical science

    Correction: Genome-wide meta-analysis identifies novel loci conferring risk of acne vulgaris.

    Teder-Laving, Maris; Kals, Mart; Reigo, Anu; Ehin, Riin; Objärtel, Telver; Vaht, Mariliis; Nikopensius, Tiit; Metspalu, Andres; Kingo, Külli (2023). European Journal of Human Genetics. DOI: 10.1038/s41431-023-01366-0.

  31. 2023 | Medical science

    Genome-wide meta-analysis identifies novel loci conferring risk of acne vulgaris.

    Teder-Laving, Maris; Kals, Mart; Reigo, Anu; Ehin, Riin; Objärtel, Telver; Vaht, Mariliis; Nikopensius, Tiit; Metspalu, Andres; Kingo, Külli (2023). European Journal of Human Genetics. DOI: 10.1038/s41431-023-01326-8.

  32. 2023 | Medical science

    Prevaccination Prevalence of Type-Specific Human Papillomavirus Infection by Grade of Cervical Cytology in Estonia.

    Uusküla, Anneli; Oja, Marek; Tamm, Sirli; Tisler, Anna; Laanpere, Made; Padrik, Lee; Nygard, Mari; Reisberg, Sulev; Vilo, Jaak; Kolde, Raivo (2023). JAMA Network Open, 6 (2), e2254075. DOI: 10.1001/jamanetworkopen.2022.54075

  33. 2023 | NLP

    Machine Translation for Low-resource Finno-Ugric Languages.

    Yankovskaya, Lisa; Tars, Maali; Tättar, Andre; Fishel, Mark (2023). In: Proceedings of the 24th Nordic Conference on Computational Linguistics, pages 762−771. Torshavn, Faroe Islands. University of Tartu Library.

  34. 2023 | Biology

    Long-range regulatory effects of Neandertal DNA in modern humans.

    Yermakovich, Danat; Pankratov, Vasili; Vosa, Urmo; Yunusbayev, Bayazit; Metspalu, Andres; Nelis, Mari; Milani, Lili; Magi, Reedik; Esko, Tonu; Dannemann, Michael; Ramachandran, Sohini (2023). Genetics, 223 (3), iyac188. DOI: 10.1093/genetics/iyac188

  1. 2022 | Medical science

    Gut metagenome associations with extensive digital health data in a volunteer-based Estonian microbiome cohort.

    Aasmets, Oliver; Krigul, Kertu L; Lüll, Kreete; Metspalu, Andres; Org, Elin (2022). Nature Communications, 13 (1), 1−11. DOI: 10.1038/s41467-022-28464-9.

  2. 2022 | Biology

    Global patterns in endemicity and vulnerability of soil fungi.

    Tedersoo, Leho; Mikryukov, Vladimir; Zizka, Alexander; Bahram, Mohammad; Hagh-Doust, Niloufar; Anslan, Sten; Prylutskyi, Oleh; Delgado-Baquerizo, Manuel; Maestre, Fernando T; … Abarenkov, Kessy (2022). Global Change Biology, 28 (22), 6696−6710. DOI: 10.1111/gcb.16398.

  3. 2022 | Medical science

    SARS-CoV-2 dual infection with Delta and Omicron variants in an immunocompetent host: a case report.

    Abroi, Aare; Gerst Talas, Ulvi; Pauskar, Merit; Shablinskaja, Arina; Reisberg, Tuuli; Niglas, Heiki; Pall, Taavi; Nelis, Mari; Tagen, Ingrid; Soodla, Pilleriin; Lutsar, Irja; Huik, Kristi (2022). International Journal of Infectious Diseases, 124, 41−44. DOI: 10.1016/j.ijid.2022.08.027.

  4. 2022 | Medical science

    Genetic variants that edit risk of immune diseases.

    Alasoo, Kaur (2022). Nature, 608, 479−480. DOI: 10.1038/d41586-022-01641-y.

  5. 2022 | Chemistry

    CO2 reduction to formate on an affordable bismuth metal-organic framework based catalyst.

    Ávila-Bolívar, Beatriz; Cepitis, Ritums; Alam, Mahboob; Assafrei, Jürgen-Martin; Ping, Kefeng; Aruväli, Jaan; Kikas, Arvo; Kisand, Vambola; Vlassov, Sergei; Käärik, Maike; Leis, Jaan; Ivaništšev, Vladislav; Starkov, Pavel; Montiel, Vicente; Solla-Gullón, José; Kongi, Nadezda (2022). Journal of CO2 Utilization, 59, 101937. DOI: 10.1016/j.jcou.2022.101937.

  6. 2022 | Biology

    Structure and function of the soil microbiome underlying N2O emissions from global wetlands.

    Bahram, Mohammad; Espenberg, Mikk; Pärn, Jaan; Lehtovirta-Morley, Laura; Anslan, Sten; Kasak, Kuno; Kõljalg, Urmas; Liira, Jaan; Maddison, Martin; Moora, Mari; Niinemets, Ülo; Öpik, Maarja; Pärtel, Meelis; Soosaar, Kaido; Zobel, Martin; Hildebrand, Falk; Tedersoo, Leho; Mander, Ülo (2022). Nature Communications, 13, 1430. DOI: 10.1038/s41467-022-29161-3.

  7. 2022 | Medical science

    Immune disease variants modulate gene expression in regulatory CD4+ T cells.

    Bossini-Castillo, Lara; Glinos, Dafni A.; Kunowska, Natalia; Golda, Gosia; Lamikanra, Abigail A.; Spitzer, Michaela; Soskic, Blagoje; Cano-Gamez, Eddie; Smyth, Deborah J.; Cattermole, Claire; Alasoo, Kaur; Mann, Alice; Kundu, Kousik; Lorenc, Anna; Soranzo, Nicole; Dunham, Ian; Roberts, David J.; Trynka, Gosia (2022). Cell Genomics, 2 (4), 100117. DOI: 10.1016/j.xgen.2022.100117.

  8. 2022 | NLP

    Cross-lingual Similarity of Multilingual Representations Revisited.

    Del, Maksym; Fishel, Mark (2022). In: Proceedings of the 2nd Conference of the Asia-Pacific Chapter of the Association for Computational Linguistics and the 12th International Joint Conference on Natural Language Processing (Volume 1: Long Papers), pages 185−195. Association for Computational Linguistics. DOI: https://arxiv.org/abs/2212.01924.

  9. 2022 | NLP

    Similarity of Sentence Representations in Multilingual LMs: Resolving Conflicting Literature and a Case Study of Baltic Languages.

    Del, Maksym; Fishel, Mark; (2022). Baltic Journal of Modern Computing, 10 (3), 337−347. DOI: 10.22364/bjmc.2022.10.3.07.

  10. 2022 | NLP

    Language resources and tools for Livonian.

    Ernštreits, Valts; Fišel, Mark; Rikters, Matīss; Tomingas, Marili; Tuisk, Tuuli (2022). Journal of Estonian and Finno-Ugric Linguistics, 13 (1), 13−36. DOI: 10.12697/jeful.2022.13.1.01.

  11. 2022 | Medical science

    Heterozygote selection against ID alleles may shape the landscape of autosomal-recessive pathogenic variants in European populations.

    Fridman, Hila; Yntema, Helger G.; Magi, Reedik; Andreson, Reidar; Metspalu, Andres; Mezzavila, Massimo; Tyler-Smith, Chris; Xue, Yali; Carmi, Shai; Levy-Lahad, Ephrat; Gilissen, Christian; Brunner, Han G. (2022). European Journal of Human Genetics, 30 (SUPPL 1, 1), 537−538.

  12. 2022 | Medical science

    BIRC6 modifies risk of invasive bacterial infection in Kenyan children.

    Gilchrist, James; Kariuki, Silvia N; Watson, James A; Band, Gavin; Uyoga, Sophie; Ndila, Carolyne M; Mturi, Neema; Mwarumba, Salim; Mohammed, Shebe; Mosobo, Moses; Alasoo, Kaur; Rockett, Kirk A; Mentzer, Alexander J; Kwiatkowski, Dominic P; Hill, Adrian VS; Maitland, Kathryn; Scott, J Anthony G; Williams, Thomas N (2022). eLife, 11, e77461. DOI: 10.7554/eLife.77461.

  13. 2022 | Medical science

    An invasive Haemophilus influenzae serotype b infection in an Anglo-Saxon plague victim.

    Guellil, Meriam; Keller, Marcel; Dittmar, Jenna M.; Inskip, Sarah A.; Cessford, Craig; Solnik, Anu; Kivisild, Toomas; Metspalu, Mait; Robb, John E.; Scheib, Christiana L. (2022). Genome Biology, 23 (1). DOI: 10.1186/s13059-021-02580-z.

  14. 2022 | Biology

    Ancient herpes simplex 1 genomes reveal recent viral structure in Eurasia.

    Guellil, Meriam; van Dorp, Lucy; Inskip, Sarah A.; Dittmar, Jenna M.; Saag, Lehti; Tambets, Kristiina; Hui, Ruoyun; Rose, Alice; D’Atanasio, Eugenia; Kriiska, Aivar; Varul, Liivi; Koekkelkoren, A. M. H. C.; Goldina, Rimma D.; Cessford, Craig; Solnik, Anu; Metspalu, Mait; Krause, Johannes; Herbig, Alexander; Robb, John E.; Houldcroft, Charlotte J. Scheib, Christiana L. (2022). Science Advances, 8 (30), eabo4435. DOI: 10.1126/sciadv.abo4435.

  15. 2022 | Medical science

    Precise, Genotype-First Breast Cancer Prevention: Experience With Transferring Monogenic Findings From a Population Biobank to the Clinical Setting.

    Jurgens, Hannes; Roht, Laura; Leitsalu, Liis; Noukas, Margit; Palover, Marili; Nikopensius, Tiit; Reigo, Anu; Kals, Mart; Kallak, Kersti; Kuetner, Riina; Budrikas, Kai; Kuusk, Saskia; Valvere, Vahur; Laidre, Piret; Toome, Kadri; Rekker, Kadri; Tooming, Mikk; Kahre, Tiina; Kruuv-Kao, Krista; ounap, Katrin … Tonisson, Neeme (2022). Frontiers in Genetics, 13, 881100. DOI: 10.3389/fgene.2022.881100.

  16. 2022 | Medical science

    Editorial: Can population health be personalized? Estonia and Finland as examples.

    Kaariainen, Helena; Metspalu, Andres; Perola, Markus (2022). Frontiers in Genetics, 13, 1051085. DOI: 10.3389/fgene.2022.1051085.

  17. 2022 | Biology

    Episodes of diversification and isolation in Island Southeast Asian and Near Oceanian male lineages.

    Karmin, Monika; Flores, Rodrigo; Saag, Lauri; Hudjashov, Georgi; Brucato, Nicolas; Crenna- Darusallam Chelzie, Larena Maximilian, Endicott Phillip, Jakobsson Mattias, Lansing Stephen, Sudoyo Herawati, Leavesley Matthew, Metspalu Mait, Ricaut François-Xavier, Cox Murray (2022). Molecular Biology and Evolution, 39 (3), msac045. DOI: 10.1093/molbev/msac045.

  18. 2022 | NLP

    Findings of the 2022 Conference on Machine Translation (WMT22).

    Kocmi, Tom; Bawden, Rachel; Bojar, Ondrej; Dvorkovich, Anton; Federmann, Christian; Fishel, Mark; Gowda, Thamme; Graham, Yvette; Grundkiewicz, Roman; Haddow, Barry; Knowles, Rebecca; Koehn, Philipp; Monz, Christof; Morishita, Makoto; Nagata, Masaaki; Nakazawa, Toshiaki; Novak, Michal; Popel, Martin; Popovic, Maja (2022). In: Proceedings of the Seventh Conference on Machine Translation (WMT), pages 1−45. Association for Computational Linguistics.

  19. 2022 | NLP

    Estonian Language Understanding: a Case Study on the COPA Task.

    Kuulmets, Hele-Andra; Tättar, Andre; Fišel, Mark (2022). Baltic Journal of Modern Computing, 10, 470−480. DOI: 10.22364/bjmc.2022.10.3.19.

  20. 2022 | Medical science

    Trajectories: a framework for detecting temporal clinical event sequences from health data standardized to the Observational Medical Outcomes Partnership (OMOP) Common Data Model.

    Künnapuu, Kadri; Ioannou, Solomon; Ligi, Kadri; Kolde, Raivo; Laur, Sven; Vilo, Jaak; Rijnbeek, Peter R; Reisberg, Sulev (2022). JAMIA Open, 5 (1), 1−11. DOI: 10.1093/jamiaopen/ooac021.

  21. 2022 | Chemistry

    Quantifying Acidity in Heterogeneous Systems: Biphasic pKa Values.

    Leesment, Andre; Selberg, Sigrid; Tammiste, Merili; Vu, Anh H; Nguyen, Thuong H; Taylor-King, Luke; Leito, Ivo (2022). Analytical Chemistry, 94 (9), 4059−4064. DOI: 10.1021/acs.analchem.1c05510.

  22. 2022 | Medical science

    Lessons learned during the process of reporting individual genomic results to participants of a population-based biobank.

    Leitsalu, Liis; Reigo, Anu; Palover, Marili; Nikopensius, Tiit; Lall, Kristi; Krebs, Kristi; Reisberg, Sulev; Magi, Reedik; Kals, Mart; Alavere, Helene; Noukas, Margit; Kolk, Anneli; Normet, Ivi; Tammesoo, Mari-Liis; Kaarik, Ene; Puusepp, Mairo; Metsalu, Kristjan; Allik, Annely; Milani, Lili; Fischer, Krista … Metspalu, Andres (2022). European Journal of Human Genetics, 31 (9). DOI: 10.1038/s41431-022-01196-6.

  23. 2022 | Medical science

    Multi-ancestry genetic study of type 2 diabetes highlights the power of diverse populations for discovery and translation.

    Mahajan, Anubha; Spracklen, Cassandra N; Zhang, Weihua; Ng, Maggie C Y; Petty, Lauren E; Kitajima, Hidetoshi; Yu, Grace Z; RĆ¼eger, Sina; Speidel, Leo; Kim, Young Jin; Horikoshi, Momoko; Mercader, Josep M; Taliun, Daniel; Moon, Sanghoon; Kwak, Soo-Heon; Robertson, Neil R; Rayner, Nigel W; Loh, Marie; Kim, Bong-Jo; Chiou, Joshua … Morris, Andrew P. (2022). Nature Genetics, 54 (5), 560−572. DOI: 10.1038/s41588-022-01058-3.

  24. 2022 | Biology

    Ancestral genomic contributions to complex traits in contemporary Europeans.

    Marnetto, Davide; Pankratov, Vasili; Mondal, Mayukh; Montinaro, Francesco; Pärna, Katri; Vallini, Leonardo; Molinaro, Ludovica; Saag, Lehti; Loog, Liisa; Montagnese, Sara; Costa, Rodolfo; Metspalu, Mait; Eriksson, Anders; Pagani, Luca (2022). Current Biology, 32 (6). DOI: 10.1016/j.cub.2022.01.046.

  25. 2022 | Biology

    Unraveling a fine-scale high genetic heterogeneity and recent continental connections of an Arabian Peninsula population.

    Eaaswarkhanth, Muthukrishnan; Pathak, Ajai K.; Ongaro, Linda; Montinaro, Francesco; Hebbar, Prashantha; Alsmadi, Osama; Metspalu, Mait; Al-Mulla, Fahd; Thanaraj, Thangavel Alphonse (2022). European Journal of Human Genetics, 30. DOI: 10.1038/s41431-021-00861-6.

  26. 2022 | Biology

    Genetic architecture of gene regulation in Indonesian populations identifies QTLs associated with global and local ancestries.

    Natri, Heini M.; Hudjashov, Georgi; Jacobs, Guy; Kusuma, Pradiptajati; Saag, Lauri; Darusallam, Chelzie Crenna; Metspalu, Mait; Sudoyo, Herawati; Cox, Murray P.; Romero, Irene Gallego; Banovich, Nicholas E. (2022). The American Journal of Human Genetics, 109 (1), 50−65. DOI: 10.1016/j.ajhg.2021.11.017.

  27. 2022 | Medical science

    Genetic and modifiable risk factors combine multiplicatively in common disease.

    Pang, Shichao; Yengo, Loic; Nelson, Christopher P.; Bourier, Felix; Zeng, Lingyao; Li, Ling; Kessler, Thorsten; Erdmann, Jeanette; Magi, Reedik; Lall, Kristi; Metspalu, Andres; Mueller-Myhsok, Bertram; Samani, Nilesh J.; Visscher, Peter M.; Schunkert, Heribert (2022). Clinical Research in Cardiology, 112 (2). DOI: 10.1007/s00392-022-02081-4.

  28. 2022 | Medical science

    A first update on mapping the human genetic architecture of COVID-19.

    Pathak, Gita A; Polimanti, Renato; Karjalainen, Juha; Daly, Mark; Ganna, Andrea; Daly, Mark J; Stevens, Christine; Kanai, Masahiro; Liao, Rachel G; Trankiem, Amy; Balaconis, Mary K; Nguyen, Huy; Solomonson, Matthew; Veerapen, Kumar; Ripatti, Samuli; Nkambul, Lindo; Bryant, Sam; Sankaran, Vijay G; Neale, Benjamin M; Karczewski, Konrad J; … Biesecker, Les (2022). Nature, 608 (7921), E1−E10. DOI: 10.1038/s41586-022-04826-7.

  29. 2022 | Medical science

    Spectrum and frequency of CHEK2 variants in breast cancer affected and general population in the Baltic states region, initial results and literature review.

    Pavlovica, Kristine; Irmejs, Arvids; Noukas, Margit; Palover, Marili; Kals, Mart; Tonisson, Neeme; Metspalu, Andres; Gronwald, Jacek; Lubinski, Jan; Murmane, Daiga; Kalnina, Agnese; Loza, Peteris; Maksimenko, Jelena; Trofimovics, Genadijs; Subatniece, Signe; Daneberga, Zanda; Miklasevics, Edvins; Gardovskis, Janis (2022). European Journal of Medical Genetics, 65 (5), 104477. DOI: 10.1016/j.ejmg.2022.104477.

  30. 2022 | Chemistry

    Measurements and Utilization of Consistent Gibbs Energies of Transfer of Single Ions: Towards a Unified Redox Potential Scale for All Solvents.

    Radtke, Valentin; Gebel, Niklas; Priester, Denis; Ermantraut, Andreas; Baeuerle, Monika; Himmel, Daniel; Stroh, Regina; Koslowski, Thorsten; Leito, Ivo; Krossing, Ingo (2022). Chemistry - A European Journal, e202200509. DOI: 10.1002/chem.202200509.

  31. 2022 | Chemistry

    Novel Lipophilic Fluorophores with Highly Acidity-Dependent Two-Photon Response.

    Rammo, Matt; Trummal, Aleksander; Uudsemaa, Merle; Pahapill, Juri; Petritsenko, Katrin; Sildoja, Meelis-Mait; Stark, Charles W.; Selberg, Sigrid; Leito, Ivo; Palmi, Kirsti; Adamson, Jasper; Rebane, Aleksander (2022). Chemistry - A European Journal, 28 (8). DOI: 10.1002/chem.202103707.

  32. 2022 | Physics

    Chlorophyll spectroscopy: conceptual basis, modern high-resolution approaches, and current challenges.

    Reimers, Jeffrey R.; Rätsep, Margus; Linnanto, Juha Matti; Freiberg, Arvi (2022). Proceedings of the Estonian Academy of Sciences, 71 (2), 127−164. DOI: 10.3176/proc.2022.2.04.

  33. 2022 | NLP

    Machine Translation for Livonian: Catering to 20 Speakers.

    Rikters, Matiss; Tomingas, Marili; Tuisk, Tuuli; Ernštreits, Valts; Fishel, Mark (2022). In: Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics, pages 508−514. Association for Computational Linguistics.

  34. 2022 | Biology

    DNA barcoding of fungal specimens using PacBio long-read high-throughput sequencing.

    Runnel, Kadri; Abarenkov, Kessy; Copot, Ovidiu; Mikryukov, Vladimir; Kõljalg, Urmas; Saar, Irja; Tedersoo, Leho (2022). Molecular Ecology Resources, 22 (8), 2871−2879. DOI: 10.1111/1755- 0998.13663.

  35. 2022 | NLP

    Estonian Text-to-Speech Synthesis with Non-autoregressive Transformers.

    Rätsep, Liisa; Lellep, Rasmus; Fishel, Mark (2022). Baltic Journal of Modern Computing, 10 (3), 447−456. DOI: 10.22364/bjmc.2022.10.3.17.

  36. 2022 | Chemistry

    One Hundred Carboxylate Receptors.

    Rüütel, Alo; Tshepelevitsh, Sofja; Leito, Ivo (2022). The Journal of Organic Chemistry, 87 (21), 14186−14193. DOI: 10.1021/acs.joc.2c01725.

  37. 2022 | Biology

    Additions to Dendrodacrys and outline of taxa with branched hyphidia in Dacrymycetes (Basidiomycota).

    Savchenko, Anton; Zamora, Juan C; Alvarenga, Renato; Kõljalg, Urmas; Miettinen, Otto (2022). Fungal Systematics and Evolution, 10, 103−126. DOI: 10.3114/fuse.2022.10.04.

  38. 2022 | Medical science

    A common founder effect of the splice site variant c.-23+1G > A in GJB2 gene causing autosomal recessive deafness 1A (DFNB1A) in Eurasia.

    Solovyev, Aisen, V; Kushniarevich, Alena; Bliznetz, Elena; Bady-Khoo, Marita; Lalayants, Maria R; Markova, Tatiana G; Minarik, Gabriel; Kadasi, L’udevit; Metspalu, Ene; Pshennikova, Vera G; Teryutin, Fedor M; Khusnutdinova, Elza K; Poliakov, Alexander; Metspalu, Mait; Posukh, Olga L; Barashkov, Nikolay A; Fedorova, Sardana A (2022). Human Genetics, 141 (3-4). DOI: 10.1007/s00439-021-02405-w.

  39. 2022 | Physics

    On‐off‐on Control of Molecular Inversion Symmetry via Multi‐stage Protonation: Elucidating Vibronic Laporte Rule.

    Stark, Charles W; Rammo, Matt; Trummal, Aleksander; Uudsemaa, Merle; Pahapill, Juri; Sildoja, Meelis-Mait; Tshepelevitsh, Sofja; Leito, Ivo; Young, David C; Szymański, Bartosz; Vakuliuk, Olena; Gryko, Daniel T; Rebane, Aleksander (2022). Angewandte Chemie International Edition, 61 (51), e202212581. DOI: 10.1002/anie.202212581.

  40. 2022 | Earth science

    Striped texture of submesoscale fields in the northeastern Baltic Proper: Results of very high-resolution modelling for summer season.

    Zhurbas, Victor; Väli, Germo; Kuzmina, Natalia (2022). Oceanologia, 64 (1), 1−21. DOI: 10.1016/j.oceano.2021.08.003.

  41. 2022 | Computer science

    A Survey of End-to-End Driving: Architectures and Training Methods.

    Tampuu, Ardi; Matiisen, Tambet; Semikin, Maksym; Fishman, Dmytro; Muhammad, Naveed (2022). IEEE Transactions on Neural Networks and Learning Systems, 33 (4), 1364−1384. DOI: 10.1109/TNNLS.2020.3043505.

  42. 2022 | NLP

    Cross-lingual Transfer from Large Multilingual Translation Models to Unseen Under-resourced Languages.

    Tars, Maali; Tättar, Andre; Fishel, Mark (2022). Baltic Journal of Modern Computing, 10 (3), 435−446. DOI: 10.22364/bjmc.2022.10.3.16.

  43. 2022 | Biology

    Global patterns in endemicity and vulnerability of soil fungi.

    Tedersoo, Leho; Mikryukov, Vladimir; Zizka, Alexander; Bahram, Mohammad; Hagh‐Doust, Niloufar; Anslan, Sten; Prylutskyi, Oleh; Delgado‐Baquerizo, Manuel; Maestre, Fernando T; Pärn, Jaan; Öpik, Maarja; Moora, Mari; Zobel, Martin; Espenberg, Mikk; Mander, Ülo; Khalid, Abdul Nasir; Corrales, Adriana; Agan, Ahto; Vasco‐Palacios, Aída‐M; Saitta, Alessandro … Abarenkov, Kessy (2022). Global Change Biology, 28 (22). DOI: 10.1111/gcb.16398.

  44. 2022 | Medical science

    Mapping genomic loci implicates genes and synaptic biology in schizophrenia.

    Trubetskoy, Vassily; Pardinas, Antonio F; Qi, Ting; Panagiotaropoulou, Georgia; Awasthi, Swapnil; Bigdeli, Tim B; Bryois, Julien; Chen, Chia-Yen; Dennison, Charlotte A; Hall, Lynsey S; Lam, Max; Watanabe, Kyoko; Frei, Oleksandr; Ge, Tian; Harwood, Janet C; Koopmans, Frank; Magnusson, Sigurdur; Richards, Alexander L; Sidorenko, Julia; Wu, Yang … (2022). Nature, 604 (7906), 502−508. DOI: 10.1038/s41586-022-04434-5.

  45. 2022 | NLP

    Open and Competitive Multilingual Neural Machine Translation in Production.

    Tättar, Andre; Purason, Taido; Kuulmets, Hele-Andra; Luhtaru, Agnes; Rätsep, Liisa; Tars, Maali; Pinnis, Marcis; Bergmanis, Toms; Fishel, Mark (2022). Baltic Journal of Modern Computing, 10, pages 422−434. DOI: 10.22364/bjmc.2022.10.3.15.

  46. 2022 | Medical science

    The 1st year of the COVID-19 epidemic in Estonia: a population-based nationwide sequential/consecutive cross-sectional study.

    Uusküla, Anneli; Kalda, Ruth; Solvak, Mihkel; Jürisson, Mikk; Käärik, Meelis; Fischer, Krista; Keis, Aime; Raudvere, Uku; Vilo, Jaak; Peterson, Hedi; Käärik, Ene; Metspalu, Mait; Jürgenson, Tuuli; Milani, Lili; Kolberg, Liis; Tiit, Ene M; Vassil, Kristjan (2022). Public Health, 205, 150−156. DOI: 10.1016/j.puhe.2022.02.004.

  1. 2021 | Biology

    Papua New Guinean Genomes Reveal the Complex Settlement of North Sahul.

    Brucato, Nicolas; André, Mathilde; Tsang, Roxanne; Saag, Lauri; Kariwiga, Jason; Sesuki, Kylie; Beni, Teppsy; Pomat, William; Muke, John; Meyer, Vincent; Boland, Anne; Deleuze, Jean- François; Sudoyo, Herawati; Mondal, Mayukh; Pagani, Luca; Gallego Romero, Irene; Metspalu, Mait; Cox, Murray P; Leavesley, Matthew; Ricaut, François-Xavier … Ávila-Arcos, Maria C (2021). Molecular Biology and Evolution, 38 (11). DOI: 10.1093/molbev/msab238.

  2. 2021 | Medical science

    Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.

    2Porcu, Eleonora; Sadler, Marie C; Lepik, Kaido; Auwerx, Chiara; Wood, Andrew R; Weihs, Antoine; Ribeiro, Diogo M; Bandinelli, Stefania; Tanaka, Toshiko; Nauck, Matthias; Volker, Uwe; Delaneau, Olivier; Metspalu, Andres; Teu-Mer, Alexander; Frayling, Timothy; Santoni, Federico A; Reymond, Alexandre; Kutalik, Zoltan (2021). Nature Communications, 12 (1). DOI: 10.1038/s41467-021-25805-y.

  3. 2021 | Chemistry

    Uncertainty of small enthalpy effects measured by isothermal calorimetric titration.

    Darnell, Astrid; Leito, Ivo; Sikk, Lauri; Porosk, Ly (2021). Journal of Chemical Metrology, 1, 25−37. DOI: 10.25135/jcm.57.21.03.1994.

  4. 2021 | NLP

    Translation Transformers Rediscover Inherent Data Domains.

    Del, Maksym; Korotkova, Elizaveta; Fishel, Mark (2021). In: Proceedings of the Sixth Conference on Machine Translation. (599−613). Association for Computational Linguistics.

  5. 2021 | Biology

    Phantom epistasis between unlinked loci.

    Hemani, Gibran; Powell, Joseph E.; Wang, Huanwei; Shakhbazov, Konstantin; Westra, Harm-Jan; Esko, Tonu; Henders, Anjali K.; McRae, Allan F.; Martin, Nicholas G.; Metspalu, Andres; Franke, Lude; Montgomery, Grant W.; Goddard, Michael E.; Gibson, Greg; Yang, Jian; Visscher, Peter M. (2021). Nature, 596 (7871), E1−U5. DOI: 10.1038/s41586-021-03765-z.

  6. 2021 | Biology

    Retraction Note: Detection and replication of epistasis influencing transcription in humans.

    Hemani, Gibran; Shakhbazov, Konstantin; Westra, Harm-Jan; Esko, Tonu; Henders, Anjali K.; McRae, Allan F.; Yang, Jian; Gibson, Greg; Martin, Nicholas G.; Metspalu, Andres; Franke, Lude; Montgomery, Grant W.; Visscher, Peter M.; Powell, Joseph E. (2021). Nature, 596 (7871), 306−306. DOI: 10.1038/s41586-021-03766-y.

  7. 2021 | Chemistry

    Energetics and Structures of Adducts of JohnPhos(Au+), PPh3(Au+), and IPr(Au+) with Organic Substrates: A Mass Spectrometry and DFT Study.

    Iacobucci, Claudio; Massi, Lionel; Dunach, Elisabet; Burk, Peeter; Gal, Jean-Francois (2021). Organometallics, 40 (11), 1642−1653. DOI: 10.1021/acs.organomet.1c00111.

  8. 2021 | Chemistry

    Hexagonal Macroparticles from Hierarchical Self-Organization of Chiral Trigonal Pd3L6 Macrotetracycles.

    Jurcek, Ondrej; Nonappa; Kalenius, Elina; Jurcek, Pia; Linnanto, Juha M.; Puttreddy, Rakesh; Valkenier, Hennie; Houbenov, Nikolay; Babiak, Michal; Peterek, Miroslav; Davis, Anthony P.; Marek, Radek; Rissanen, Kari (2021). Cell Reports Physical Science, 2, 100303-1−100303-19. DOI: 10.1016/j.xcrp.2020.100303.

  9. 2021 | Biology

    A compendium of uniformly processed human gene expression and splicing quantitative trait loci.

    Kerimov, Nurlan; Hayhurst, James D.; Peikova, Kateryna; Manning, Jonathan R.; Walter, Peter; Kolberg, Liis; Samoviča, Marija; Sakthivel, Manoj Pandian; Kuzmin, Ivan; Trevanion, Stephen J.; Burdett, Tony; Jupp, Simon; Parkinson, Helen; Papatheodorou, Irene; Yates, Andrew D.; Zerbino, Daniel R.; Alasoo, Kaur (2021). Nature Genetics, 53, 1290−1299. DOI: 10.1038/s41588-021-00924-w.

  10. 2021 | Biology

    Patterns of genetic connectedness between modern and medieval Estonian genomes reveal the origins of a major ancestry component of the Finnish population.

    Kivisild, Toomas; Saag, Lehti; Hui, Ruoyun; Biagini, Simone Andrea; Pankratov, Vasili; D’Atanasio, Eugenia; Pagani, Luca; Saag, Lauri; Rootsi, Siiri; Magi, Reedik; Metspalu, Ene; Valk, Heiki; Malve, Martin; Irdt, Kadri; Reisberg, Tuuli; Solnik, Anu; Scheib, Christiana L.; Seidman, Daniel N; Williams, Amy L; Tambets, Kristiina … Metspalu, Mait (2021). The American Journal of Human Genetics, 108 (9), 1792−1806. DOI: 10.1016/j.ajhg.2021.07.012.

  11. 2021 | Earth science

    Hazardous substances in the sediments and their pathways from potential sources in the eastern Gulf of Finland.

    Kuprijanov, Ivan.; Väli, Germo.; Sharov, Andrey.; Berezina, Nadezhda.; Liblik, Taavi.; Lips, Urmas.; Kolesova, Natalja.; Maanio, Jaakko.; Junttila, Ville.; Lips, Inga. (2021). Marine Pollution Bulletin, 170. DOI: 10.1016/j.marpolbul.2021.112642.

  12. 2021 | Chemistry

    Strengths of Acids in Acetonitrile.

    Kütt, Agnes; Tshepelevitsh, Sofja; Saame, Jaan; Lõkov, Märt; Kaljurand, Ivari; Selberg, Sigrid; Leito, Ivo (2021). European Journal of Organic Chemistry, 2021 (9), 1407−1419. DOI: 10.1002/ejoc.202001649.

  13. 2021 | Medical science

    Post-Aire Medullary Thymic Epithelial Cells and Hassall’s Corpuscles as Inducers of Tonic Pro-Inflammatory Microenvironment.

    Laan, Martti; Salumets, Ahto; Klein, Annabel; Reintamm, Kerli; Bichele, Rudolf; Peterson, Hedi; Peterson, Pärt (2021). Frontiers in Immunology, 12 (12). DOI: 10.3389/fimmu.2021.635569.

  14. 2021 | Biology

    Soomeugrilaste geneetilised juured.

    Metspalu, Mait; Saag; Lehti; Tambets, Kristiina (2021). Eesti Loodus, 6, 32−36.

  15. 2021 | Biology

    Evaluating the Impact of Sex-Biased Genetic Admixture in the Americas through the Analysis of Haplotype Data.

    Ongaro, Linda; Molinaro, Ludovica; Flores, Rodrigo; Marnetto, Davide; Capodiferro, Marco R.; Alarcón-Riquelme, Marta E.; Moreno-Estrada, Andrés; Mabunda, Nedio; Ventura, Mario; Tambets, Kristiina; Achilli, Alessandro; Capelli, Cristian; Metspalu, Mait; Pagani, Luca; Montinaro, Francesco (2021). Genes, 12 (10). DOI: 10.3390/genes12101580.

  16. 2021 | Biology

    Continental-scale genomic analysis suggests shared post-admixture adaptation in the Americas.

    Ongaro, Linda; Mondal, Mayukh; Flores, Rodrigo; Marnetto, Davide; Molinaro, Ludovica; Alarcón-Riquelme, Marta E; Moreno-Estrada, Andrés; Mabunda, Nedio; Ventura, Mario; Tambets, Kristiina; Hellenthal, Garrett; Capelli, Cristian; Kivisild, Toomas; Metspalu, Mait; Pagani, Luca; Montinaro, Francesco (2021). Human Molecular Genetics, 30 (22), 2123-2134. DOI: 10.1093/hmg/ddab177.

  17. 2021 | Chemistry

    Quantitative electrospray ionization efficiency scale: 10 years after.

    Oss, Merit; Tshepelevitsh, Sofja; Kruve, Anneli; Liigand, Piia; Liigand, Jaanus; Rebane, Riin; Selberg, Sigrid; Ets, Kristel; Herodes, Koit; Leito, Ivo (2021). Rapid Communications in Mass Spectrometry, 35 (21), ARTN e9178. DOI: 10.1002/rcm.9178.

  18. 2021 | Biology

    Genetic ancestry changes in Stone to Bronze Age transition in the East European plain.

    Saag, Lehti; Vasilyev, Sergey V; Varul, Liivi; Kosorukova, Natalia V; Gerasimov, Dmitri V; Oshibkina, Svetlana V; Griffith, Samuel J; Solnik, Anu; Saag, Lauri; D’Atanasio, Eugenia; Metspalu, Ene; Reidla, Maere; Rootsi, Siiri; Kivisild, Toomas; Scheib, Christiana Lyn; Tambets, Kristiina; Kriiska, Aivar; Metspalu, Mait (2021). Science Advances, 7 (4). DOI: 10.1126/sciadv.abd6535.

  19. 2021 | Biology

    Origin and diffusion of human Y chromosome haplogroup J1-M267.

    Sahakyan, Hovhannes; Margaryan, Ashot; Saag, Lauri; Karmin, Monika; Flores, Rodrigo; Haber, Marc; Kushniarevich, Alena; Khachatryan, Zaruhi; Bahmanimehr, Ardeshir; Parik, Jüri; Karafet, Tatiana; Yunusbayev, Bayazit; Reisberg, Tuuli; Solnik, Anu; Metspalu, Ene; Hovhannisyan, Anahit; Khusnutdinova, Elza K.; Behar, Doron M.; Metspalu, Mait; Yepiskoposyan, Levon; Rootsi, Siiri; Villems, Richard (2021). Scientific Reports, 11, 6659. DOI: 10.1038/s41598-021-85883-2.

  20. 2021 | Biology

    Ancient genomes reveal structural shifts after the arrival of Steppe-related ancestry in the Italian Peninsula.

    Saupe, T.; Montinaro, F.; Scaggion, C.; Carrara, N.; Kivisild, T.; D’Atanasio, E.; Hui, R.; Solnik, A.; Lebrasseur, O.; Larson, G.; Alessandri, L.; Arienzo, I.; De Angelis, F.; Rolfo, M.F.; Skeates, R.; Silvestri, L.; Beckett, J.; Talamo, S.; Dolfini, A.; Miari, M. Scheib, C.L. (2021). Current Biology, 31 (12), 2576−2591.e12. DOI: 10.1016/j.cub.2021.04.022.

  21. 2021 | Biology

    Dissecting the paternal founders of Mundari (Austroasiatic) speakers associated with the language dispersal in South Asia.

    Singh, Prajjval Pratap; Vishwakarma, Shani; Sultana, Gazi Nurun Nahar; Pilvar, Arno; Karmin, Monika; Rootsi, Siiri; Villems, Richard; Metspalu, Mait; Behar, Doron M.; Kivisild, Toomas; van Driem, George; Chaubey, Gyaneshwer (2021). European Journal of Human Genetics, 29, 528−532. DOI: 10.1038/s41431-020-00745-1.

  22. 2021 | Chemistry

    Experimental and Computational Study of Aminoacridines as MALDI(−)-MS Matrix Materials for the Analysis of Complex Samples.

    Tammekivi, Eliise; Ghiami-Shomami, Ali; Tshepelevitsh, Sofja; Trummal, Aleksander; Ilisson, Mihkel; Selberg, Sigrid; Vahur, Signe; Teearu, Anu; Lõkov, Märt; Peets, Pilleriin; Pagano, Todd; Leito, Ivo (2021). Journal of the American Society for Mass Spectrometry, 32 (4), 1080−1095. DOI: 10.1021/jasms.1c00037.

  23. 2021 | Biology

    The Ami and Yami aborigines of Taiwan and their genetic relationship to East Asian and Pacific populations.

    Tatte, Kai; Metspalu, Ene; Post, Helen; Palencia-Madrid, Leire; Luis, Javier Rodriguez; Reidla, Maere; Rea, Anneliis; Tamm, Erika; Moding, Everett J.; de Pancorbo, Marian M.; Garcia- Bertrand, Ralph; Metspalu, Mait; Herrera, Rene J. (2021). European Journal Of Human Genetics, 29 (7), 1092−1102. DOI: 10.1038/s41431-021-00837-6.

  24. 2021 | Chemistry

    Hydrostatic High-Pressure-Induced Denaturation of LH2 Membrane Proteins.

    Timpmann, Kou; Linnanto, Juha Matti; Yadav, Dheerendra; Kangur, Liina; Freiberg, Arvi (2021). The Journal of Physical Chemistry B, 125 (35), 9979−9989. DOI: 10.1021/acs.jpcb.1c05789.

  25. 2021 | Medical science

    The 1st year of the COVID-19 epidemic in Estonia: an interrupted time series of population based nationwide cross-sectional studies.

    Uusküla, Anneli; Kalda, Ruth; Solvak, Mihkel; Jürisson, Mikk; Käärik, Meelis; Fischer, Krista; Keis, Aime; Raudvere, Uku; Vilo, Jaak; Peterson, Hedi; Käärik, Ene; Metspalu, Mait; Jürgenson, Tuuli; Milani, Lili; Kolberg, Liis; Tiit, Ene-Margit; Vassil, Kristjan (2021). medRxiv, 1−22. DOI: 10.1101/2021.09.06.21263154.

  26. 2021 | Biology

    Ancestral patterns of recessive dystrophic epidermolysis bullosa mutations in Hispanic populations suggest sephardic ancestry.

    Warshauer, Emily Mira; Brown, Adam; Fuentes, Ignacia; Shortt, Jonathan; Gignoux, Chris; Montinaro, Francesco; Metspalu, Mait; Youssefian, Leila; Vahidnezhad, Hassan; Jackow, Joanna; Christiano, Angela M.; Uitto, Jouni; Fajardo-Ramirez, Oscar R.; Salas-Alanis, Julio C.; McGrath, John A.; Consuegra, Liliana; Rivera, Carolina; Maier, Paul A.; Runfeldt, Goran; Behar, Doron M. … Roop, Dennis R. (2021). American Journal of Medical Genetics Part A, 185 (11), 3390−3400. DOI: 10.1002/ajmg.a.62456.

  27. 2021 | Biology

    Ancestral contributions to contemporary European complex traits.

    Marnetto, Davide; Pankratov, Vasili; Mondal, Mayukh; Montinaro, Francesco; Pärna, Katri; Vallini, Leonardo; Molinaro, Ludovica; Saag, Lehti; Loog, Liisa; Montagnese, Sara; Costa, Rodolfo; Metspalu, Mait; Eriksson, Anders; Pagani, Luca. (2021). DOI: 10.1101/2021.08.03.454888.

  28. 2021 | Earth science

    Seasonality Of Submesoscale Coherent Vortices In The Northern Baltic Proper: A Model Study.

    Väli, Germo.; Zhurbas, Victor. (2021). Фундаментальная и прикладная гидрофизика, 3, 122−129. DOI: 10.7868/S2073667321030114.

  29. 2021 | NLP

    Direct Exploitation of Attention Weights for Translation Quality Estimation.

    Yankovskaya, Lisa; Fishel, Mark (2021). Association for Computational Linguistics, 955−960.

  1. 2020 | Chemistry

    Computational Studies of Acidities of Some Hydrodxycoumarins.

    Ghiami-Shomami, Ali; Ashtari-Delivand, Mona; Ghalami-Choobar, Bahram; Leito, Ivo (2020). Computational & Theoretical Chemistry, 1190. DOI: 10.1016/j.comptc.2020.113008

  2. 2020 | Medical science

    Mapping of ACE2 binding site on SARS-CoV-2 spike protein S1: docking study with peptides.

    Kuznetsov, Aleksei; Järv, Jaak (2020). Proceedings of the Estonian Academy of Sciences, 69 (3).

  3. 2020 | Chemistry

    Predicting adsorption selectivities from pure gas isotherms for gas mixtures in metal-organic frameworks.

    Kundu, Arpan; Sillar, Kaido; Sauer, Joachim (2020). Chemical Science, 11, 643-655. DOI: 10.1039/C9SC03008E

  4. 2020 | Biology

    Global patterns and determinants of bacterial communities associated with ectomycorrhizal root tips of Alnus species.

    Aslani, Farzad; Tedersoo, Leho; Põlme, Sergei; Knox, Oliver; Bahram, Mohammad (2020). Soil Biology and Biochemistry, 148, 107923. DOI: 10.1016/j.soilbio.2020.107923

  5. 2020 | Chemistry

    DFT study of 2,9-bis(1,2,4-triazin-3-yl)-1,10-phenanthroline (BTPhen) and its derivatives complexation with lanthanide series.

    Burk, Jaanus; Adamson, Aiko; Sikk, Lauri; Tämm, Kaido; Pupart, Anni; Burk, Peeter (2020). Computational and Theoretical Chemistry, 1175, 112729. DOI: 10.1016/j.comptc.2020.112729.

  6. 2020 | Biology

    Correction to: Archaic mitochondrial DNA inserts in modern day nuclear genomes.

    Bücking, Robert; Cox, Murray P; Hudjashov, Georgi; Saag, Lauri; Sudoyo, Herawati; Stoneking, Mark (2020). BMC Genomics, 21, (55). DOI: 10.1186/s12864-020-6449-8.

  7. 2020 | Biology

    Ancestry deconvolution and partial polygenic score can improve susceptibility predictions in recently admixed individuals.

    Marnetto, Davide; Pärna, Katri; Läll, Kristi; Molinaro, Ludovica; Montinaro, Francesco; Haller, Toomas; Metspalu, Mait; Mägi, Reedik; Fischer, Krista; Pagani, Luca (2020). Nature Communications volume 11, 1628. DOI: 10.1038/s41467-020-15464-w.

  8. 2020 | Chemistry

    Understanding the Behavior of Fully Non-Toxic Polypyrrole-Gelatin and Polypyrrole-PVdF Soft Actuators with Choline Ionic Liquids.

    Elhi, Fred; Karu, Karl; Rinne, Pille; Nadel, Kadi-Anne; Jarvekulg, Martin; Aabloo, Alvo; Tamm, Tarmo; Ivanistsev, Vladislav; Pohako-Esko, Kaija (2020). Actuators, 9 (2). DOI: 10.3390/act9020040.

  9. 2020 | Chemistry

    Graphene–Ionic Liquid Interfacial Potential Drop from Density Functional Theory-Based Molecular Dynamics Simulations.

    Ers, Heigo; Lembinen, Meeri; Mišin, Maksim; Seitsonen, Ari P.; Fedorov, Maxim V.; Ivaništšev, Vladislav B. (2020). Journal of Physical Chemistry C, 124 (36), 19548−19555. DOI: 10.1021/acs.jpcc.0c02964.

  10. 2020 | NLP

    BERGAMOT-LATTE Submissions for the WMT20 Quality Estimation Shared Task.

    Fomicheva, Marina; Sun, Shuo; Yankovskaya, Lisa; Blain, Frederic; Chaudhary, Vishrav; Fishel, Mark; Guzman, Francisco; Specia, Lucia (2020). Association for Computational Linguistics, 1008−1015.

  11. 2020 | NLP

    Unsupervised Quality Estimation for Neural Machine Translation.

    Fomicheva, Marina; Sun, Shuo; Yankovskaya, Lisa; Blain, Frédéric; Guzmán, Francisco; Fishel, Mark; Aletras, Nikolaos; Chaudhary, Vishrav; Specia, Lucia (2020). Transactions of the Association for Computational Linguistics, 8, 539−555. DOI: 10.1162/tacl_a_00330.

  12. 2020 | Medical science

    Identification of fetal unmodified and 5-hydroxymethylated CG sites in maternal cell-free DNA for non-invasive prenatal testing.

    Gordevičius, Juozas; Narmontė, Milda; Gibas, Povilas; Kvederavičiūtė, Kotryna; Tomkutė, Vita; Paluoja, Priit; Krjutškov, Kaarel; Salumets, Andres; Kriukienė, Edita (2020). Clinical Epigenetics, 12 (1). DOI: 10.1186/s13148-020-00938-x.

  13. 2020 | Computer science

    Cycle-Consistent Adversarial Neural Networks Based Low Quality Fingerprint Enhancement.

    Karabulut, Dogus; Tertychnyi, Pavlo; Arslan, Hasan S; Ozcinar, Cagri; Nasrollahi, Kamal; Valls, Joan; Vilaseca, Joan; Moeslund, Thomas B; Anbarjafari, Gholamreza (2020). Multimedia Tools and Applications, 79, 1. DOI: 10.1007/s11042-020-08750-8.

  14. 2020 | NLP

    Evaluating Multilingual BERT for Estonian.

    Kittask, Claudia; Milintsevich, Kirill; Sirts, Kairit (2020). Baltic HLT (pp. 19-26). DOI: 10.48550/arXiv.2010.00454.

  15. 2020 | Biology

    Co-expression analysis reveals interpretable gene modules controlled by trans-acting genetic variants.

    Kolberg, Liis; Kerimov, Nurlan; Peterson, Hedi; Alasoo, Kaur (2020). eLife, 9, e58705. DOI: 10.7554/eLife.58705.

  16. 2020 | Physics

    Establishment of the Qy Absorption Spectrum of Chlorophyll a Extending to Near-Infrared.

    Leiger, Kristjan; Linnanto, Juha Matti; Freiberg, Arvi (2020). Molecules, 25 (17), 3796. DOI: 10.3390/molecules25173796.

  17. 2020 | Chemistry

    Calculation of core‐level electron spectra of ionic liquids.

    Lembinen, Meeri; Nõmmiste, Ergo; Ers, Heigo; Docampo‐Álvarez, Borja; Kruusma, Jaanus; Lust, Enn; Ivaništšev, Vladislav B (2020). International Journal of Quantum Chemistry. e26247. DOI: 10.1002/qua.26247.

  18. 2020 | Medical science

    A genomic and historical synthesis of plague in 18th century Eurasia.

    Guellil, Meriam; Kersten, Oliver; Namouchi, Amine; Luciani, Stefania; Marota, Isolina; Arcini, Caroline A; Iregren, Elisabeth; Lindemann, Robert A; Warfvinge, Gunnar; Bakanidze, Lela; Bitadze, Lia; Rubini, Mauro; Zaio, Paola; Zaio, Monica; Neri, Damiano; Stenseth, N. C; Bramanti, Barbara (2020). PNAS, 117 (45), 28328-28335. DOI: 10.1073/pnas.2009677117

  19. 2020 | Biology

    Genome-wide DNA methylation and gene expression patterns reflect genetic ancestry and environmental differences across the Indonesian archipelago.

    Natri, Heini M; Bobowik, Katalina S; Kusuma, Pradiptajati; Darusallam, Crenna C; Jacobs, Guy S; Hudjashov, Georgi; Lansing, Stephen J; Sudoyo, Herawati; Banovich, Nicholas E; Cox, Murray P; Romero, Gallego I (2020). PLoS Genetics, 16(5):e1008749. DOI: 10.1371/journal.pgen.1008749.

  20. 2020 | Medical science

    Genetic and in vitro inhibition of PCSK9 and calcific aortic valve stenosis.

    Perrot, Nicholas; Valerio, Valerio; Moschetta, Donato; Boekholdt, Matthijs S; Dina, Christian; Chen, Hao Y; Abner, Erik; Martinsson, Andreas; Manikpurage, Hasanga D; Rigade, Sidwell; Capoulade, Romain; Mass, Elvira; Clavel, Marie-Annick; Le Tourneau, Thierry; Messika-Zeitoun, David; Wareham, Nicholas J; Engert, James C; Polvani, Gustav; Pibarot, Philippe; Esko, Tõnu; … Arsenault, Benoit J (2020). JACC: Basic to Translational Science. 5 (7). DOI: 10.1016/j.jacbts.2020.05.004.

  21. 2020 | Biology

    Multidisciplinary investigation of two Egyptian child mummies curated at the University of Tartu Art Museum, Estonia (Late/Graeco-Roman Periods).

    Oras, Ester; Anderson, Jaanika; Tõrv, Mari; Vahur, Signe; Rammo, Riina; Remmer, Sunne; Mölder, Maarja; Malve, Martin; Saag, Lehti; Saage, Ragnar; Teearu-Ojakäär, Anu; Peets, Pilleriin; Tambets, Kristiina; Metspalu, Mait; Lees, David C; Barclay, Maxwell V L; Hall, Martin J R; Ikram, Salima; Piombino-Mascali, Dario (2020) PLoS One, 15(1): e0227446. DOI: 10.1371/journal.pone.0227446.

  22. 2020 | Biology

    Differences in local population history at the finest level: the case of the Estonian population.

    Pankratov, Vasili; Montinaro, Francesco; Kushniarevich, Alena; Hudjashov, Georgi; Jay, Flora; Saag, Lauri, Flores, Rodrigo; Marnetto, Davide; Seppel, Marten; Kals, Mart; Võsa, Urmo; Taccioli, Cristian; Möls, Märt; Milani, Lili; Aasa, Anto; Lawson, Daniel J; Esko, Tõnu; Mägi, Reedik; Pagani, Luca; Metspalu, Andres; Metspalu, Mait (2020). European journal of human genetics, 28 (11). DOI: 10.1038/s41431-020-0699-4.

  23. 2020 | Biology

    Evaluating genotype imputation pipeline for ultra low coverage ancient genomes.

    Hui, Ruoyun; D’Atanasio, Eugenia; Cassidy, Lara M; Scheib, Christiana L; Kivisild, Toomas (2020). Scientific Reports 10, 18542. DOI: 10.1038/s41598-020-75387-w.

  24. 2020 | Chemistry

    LogP determination for highly lipophilic hydrogen-bonding anion receptor molecules

    Tshepelevitsh, Sofja; Kadam, Sandip A; Darnell, Astrid; Bobacka, Johan; Rüütel, Alo; Haljasorg, Tõiv; Leito, Ivo (2020). Analytica Chimica Acta, 1132. DOI: 10.1016/j.aca.2020.07.024

  25. 2020 | Medical science

    Fetal HLA-G mediated immune tolerance and interferon response in preeclampsia.

    Wedenoja, Satu; Yoshihara, Masahito; Teder, Hindrek; Sariola, Hannu; Gissler, Mika; Katayama, Shintaro; Wedenoja, Juho; Häkkinen, Inka M; Ezer, Sini; Linder, Nina; Lundin, Johan; Skoog, Tiina; Sahlin, Ellika; Iwarsson, Erik; Pettersson, Karin; Kajantie, Eero; Mokkonen, Mikael; Heinonen, Seppo; Laivuori, Hannele; Krjutškov, Kaarel … Kere, Juha (2020). EBioMedicine, 59, 102872−102872. DOI: 10.1016/j.ebiom.2020.102872.

  26. 2020 | Biology

    A human-specific VNTR in the TRIB3 promoter causes gene expression variation between individuals.

    Örd, Tiit; Puurand, Tarmo; Örd, Daima; Annilo, Tarmo; Möls, Märt; Remm, Maido; Örd, Tõnis (2020). PLoS Genetics, 16(8):e1008981. DOI: 10.1371/journal.pgen.1008981.

  27. 2020 | Computer science

    Failure analysis of the interval-passing algorithm for compressed sensing.

    Yakimenka, Yauhen; Rosnes, Eirik (2020). IEEE Transactions on Information Theory, 66 (4). DOI: 10.1109/TIT.2020.2969163

  1. 2019 | Earth science

    Hindcast of the mesoscale eddy field in the Southeastern Baltic Sea: Model output vs satellite imagery.

    Zhurbas, V; Väli, G; Kostianoy, A; Lavrova, O (2019). Russian Journal of Earth Sciences, 19 (4):1-17. DOI: 10.2205/2019ES000672.

  2. 2019 | Earth science

    Rotation of floating particles in submesoscale cyclonic and anticyclonic eddies: a model study for the southeastern Baltic Sea.

    Zhurbas, V; Väli, G; Kuzmina, N (2019). Ocean Science, 15 (6):1691-1705. DOI: 10.5194/os-15-1691-2019.

  3. 2019 | Biology

    Ancestry-specific analyses reveal differential demographic histories and opposite selective pressures in modern South Asian populations.

    Yelmen, B; Mondal, M; Marnetto, D, Pathak, A; Montinaro, F; Romero, I G; Kivisild, T; Metspalu, M; Pagani, L (2019). Molecular biology and evolution 36 (8):1628-1642. DOI: 10.1093/molbev/msz037.

  4. 2019 | Earth science

    Satellite-assisted monitoring of water quality to support the implementation of the Water Framework Directive.

    Papathanasopoulou, Eleni; Simis, Stefan; Alikas, Krista; Ansper, Ave; Anttila, Saku; Attila, Jenni et al (2019). Zenodo. DOI: 10.5281/zenodo.3903776.

  5. 2019 | Biology

    Multiple Deeply Divergent Denisovan Ancestries in Papuans.

    Jacobs GS, Hudjashov G, Saag L, Kusuma P, Darusallam CC, Lawson DJ, Mondal M, Pagani L, Ricaut FX, Stoneking M, Metspalu M, Sudoyo H, Lansing JS, Cox MP (2019). Cell, 177 (4). DOI: 10.1016/j.cell.2019.02.035.

  6. 2019 | Biology

    Archaic mitochondrial DNA inserts in modern day nuclear genomes.

    Bücking R, Cox MP, Hudjashov G, Saag L, Sudoyo H, Stoneking M (2019). BMC Genomics, 20 (1). DOI: 10.1186/s12864-019-6392-8.

  7. 2019 | Chemistry

    Predicting Melting Points of Biofriendly Choline-Based Ionic Liquids with Molecular Dynamics.

    Karu, Karl; Elhi, Fred; Põhako-Esko, Kaija; Ivaništšev, Vladislav (2019). Applied Sciences, 9 (24). DOI: 10.3390/app9245367.

  8. 2019 | Biology

    AluMine: alignment-free method for the discovery of polymorphic Alu element insertions.

    Puurand T, Kukuškina V, Pajuste FD, Remm M (2019). Mobile DNA, 10:31. DOI: 10.1186/s13100-019-0174-3.

  9. 2019 | Biology

    Genome-wide analysis of Corsican population reveals a close affinity with Northern and Central Italy.

    Tamm, E, Di Cristofaro, J, Mazières, S et al (2019). Sci Rep, 9 (1). DOI: 10.1038/s41598-019-49901-8.

  10. 2019 | Archaeology

    Evaluating macroscopic sex estimation methods using genetically sexed archaeological material: The medieval skeletal collection from St John’s Divinity School, Cambridge.

    Inskip, S, Scheib, CL, Wohns, AW, Ge, X, Kivisild, T, & Robb, (2019). American Journal of Physical Anthropology, 168 (2). DOI: 10.1002/ajpa.23753.

  11. 2019 | Biology

    Shifts in the Genetic Landscape of the Western Eurasian Steppe Associated with the Beginning and End of the Scythian Dominance.

    Järve M, Saag L, Scheib CL, Pathak AK, Montinaro F, Pagani L, Flores R, Guellil M, Saag L, Tambets K, et al (2019). Current Biology: 29 (14). DOI: 10.1016/j.cub.2019.06.019.

  12. 2019 | Biology

    The Arrival of Siberian Ancestry Connecting the Eastern Baltic to Uralic Speakers further East.

    Thomas MG, Kriiska A, Kivisild T, Villems R, Lang V, Metspalu M, Tambets K (2019). Current Biology, 29 (10). DOI: 10.1016/j.cub.2019.04.026.

  13. 2019 | Archaeology

    East Anglian early Neolithic monument burial linked to contemporary Megaliths.

    Scheib, CL, Hui, R, D’Atanasio, E, Wohns, AW, Inskip, SA, Rose, A, Cessford, C, O’Connell, TC, Robb, JE, Evans, C, Patten, R; Kivisild, T (2019). Annals of Human Biology, 46 (2). DOI: 10.1080/03014460.2019.1623912.

  14. 2019 | Physics

    Absorption-emission symmetry breaking and the different origins of vibrational structures of the 1Qy and 1Qx electronic transitions of pheophytin aJ.

    Rätsep M, Linnanto JM, Muru R, Biczysko M, Reimers JR, Freiberg A (2019). Chem. Phys. 151 (16). DOI: 10.1063/1.5116265.

  15. 2019 | Biology

    The genomic impact of European colonization of the Americas.

    Ongaro L, Scliar MO, Flores R, Raveane A, Marnetto D, Sarno S, Gnecchi-Ruscone GA, Alarcón-Riquelme ME, et al (2019). Current Biology, 29(23):3974-3986.e4. DOI: 10.1016/j.cub.2019.09.076.

  16. 2019 | Biology

    Y-chromosomal connection between Hungarians and geographically distant populations of the Ural Mountain region and West Siberia.

    Post H, Nemeth E, Klima L, Flores R, Feher T, Türk A, Székely G, Sahakyan H, Mondal M, Montinaro F, Karmin M, Saag L, Yunusbayev B, Khusnutdinova EK, Metspalu E, Villems R, Tambets K, Rootsi S (2019). Scientific Reports, 9 (1):7786. DOI: 10.1038/s41598-019-44272-6.

  17. 2019 | Biology

    Y-chromosomal analysis of clan structure of Kalmyks, the only European Mongol people, and their relationship to Oirat-Mongols of Inner Asia.

    Balinova N, Post H, Kushniarevich A, Flores R, Karmin M, Sahakyan H, Reidla M, Metspalu E, Litvinov S, Dzhaubermezov M, Akhmetova V, Khusainova R, et al (2019). European Journal of Human Genetics, 27 (9):1466-1474. DOI: 10.1038/s41431-019-0399-0.

  18. 2019 | Biology

    g: Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update).

    Raudvere, Uku; Kolberg, Liis; Kuzmin, Ivan; Arak, Tambet; Adler, Priit; Peterson, Hedi; Vilo, Jaak (2019). Nucleic acids research, 47 (W1):W191-W198. DOI: 10.1093/nar/gkz369.

  19. 2019 | Biology

    West Asian sources of the Eurasian component in Ethiopians: a reassessment.

    Molinaro, L, Montinaro, F, Yelmen, B, Marnetto, D, Behar, DM, Kivisild, T, Pagani, L (2019). Scientific Reports, 9 (1):18811. DOI: 10.1038/s41598-019-55344-y.

  20. 2019 | Biology

    A Transient Pulse of Genetic Admixture from the Crusaders in the Near East Identified from Ancient Genome Sequences.

    Haber M, Doumet-Serhal C, Scheib CL, Xue Y, Mikulski R, Martiniano R, Fischer-Genz B, Schutkowski H, Kivisild T, Tyler-Smith C. (2019). American Journal of Human Genetics, 104 (5):977-984. DOI: 10.1016/j.ajhg.2019.03.015.

  21. 2019 | Biology

    The genetic legacy of continental scale admixture in Indian Austroasiatic speakers.

    Tätte K, Pagani L, Pathak AK, Kõks S, Ho Duy B, Ho XD, Sultana GNN, Sharif MI, Asaduzzaman M, Behar DM, Hadid Y, Villems R, Chaubey G, Kivisild T, Metspalu M. (2019). Scientific Reports, 9 (1):3818. DOI: 10.1038/s41598-019-40399-8.

  22. 2019 | Biology

    Y Chromosome Sequences Reveal a Short Beringian Standstill, Rapid Expansion, and early Population structure of Native American Founders.

    Pinotti T, Bergström A, Geppert M, Bawn M, Ohasi D, Shi W, Lacerda DR, Solli A, Norstedt J, Reed K, et al (2019). Current Biology, 29 (1):149-157.e3. DOI: 10.1016/j.cub.2018.11.029.

  23. 2019 | Biology

    Reconstructing recent population history while mapping rare variants using haplotypes.

    Yunusbaev U, Valeev A, Yunusbaeva M, Kwon HW, Mägi R, Metspalu M, Yunusbayev B (2019). Sci Rep. 9 (1):5849. DOI: 10.1038/s41598-019-42385-6.

  24. 2019 | Physics

    Valence electronic structure of [EMIM][B(CN)4]: ion-pair vs. bulk description.

    Kuusik I, Berholts M, Kruusma J, Tõnisoo A, Lust E, Nõmmiste E, Kisand V (2019). RSC Advances, 9 (57):33140-33146. DOI: 10.1039/c9ra06762k.

  25. 2019 | Computer science

    Multimodal Sequential Fashion Attribute Prediction.

    Hasan Sait Arslan, Kairit Sirts, Mark Fishel, Gholamreza Anbarjafari (2019). Information, 10 (10):308. DOI: 10.3390/info10100308.

  26. 2019 | Medical science

    Computational framework for targeted high coverage sequencing based NIPT.

    Teder, Hindrek; Paluoja, Priit; Rekker, Kadri; Salumets, Andres; Krjutskov, Kaarel; Palta, Priit (2019). PLoS ONE, 14 (7):e0209139. DOI: 10.1371/journal.pone.0209139.

  27. 2019 | Medical science

    Creating basis for introducing non-invasive prenatal testing in the Estonian public health setting.

    Žilina, Olga; Rekker, Kadri; Kaplinski, Lauris; Sauk, Martin; Paluoja, Priit; Teder, Hindrek; Ustav, Eva-Liina; Tõnisson, Neeme; Reimand, Tiia; Ridnoi, Konstantin; Palta, Priit; Vermeesch, Joris Robert; Krjutškov, Kaarel; Kurg, Ants; Salumets, Andres (2019). Prenatal Diagnosis, 39 (13):1262−1268. DOI: 10.1002/pd.5578.

  28. 2019 | Medical science

    A molecular tool for menstrual cycle phase dating of endometrial samples in endometriosis transcriptome studies.

    Saare, Merli; Laisk, Triin; Teder, Hindrek; Paluoja, Priit; Palta, Priit; Koel, Mariann; Kirss, Fred; Karro, Helle; Sõritsa, Deniss; Salumets, Andres; Krjutškov, Kaarel; Peters, Maire (2019). Biology of Reproduction, 101 (4):868−868. DOI: 10.1093/biolre/ioz092.

  29. 2019 | Biology

    Genetic effects on promoter usage are highly context-specific and contribute to complex traits.

    Alasoo, Kaur; Rodrigues, Julia; Danesh, John; Freitag, Daniel F; Paul, Dirk S; Gaffney Daniel J (2019). Elife, 8:e41673. DOI: 10.7554/eLife.41673.

  30. 2019 | NLP

    Grammatical Error Correction and Style Transfer via Zero-shot Monolingual Translation.

    Korotkova, Elizaveta; Luhtaru, Agnes; Del, Maksym; Liin, Krista; Deksne, Daiga; Fishel, Mark (2019). DOI: arXiv:1903.11283.

  31. 2019 | NLP

    University of Tartu’s Multilingual Multi-domain WMT19 News Translation Shared Task Submission.

    Tättar, Andre; Korotkova, Elizaveta; Fishel, Mark (2019). In: Proceedings of the Fourth Conference on Machine Translation (Volume 2), pages 382−385. Association for Computational Linguistics. DOI: 10.18653/v1/W19-5342.

  32. 2019 | Computer science

    Learning Accurate LSTM Models of Business Processes.

    Camargo, Manuel; Dumas, Marlon; González-Rojas Oscar (2019). In: BPM 2019. Lecture Notes in Computer Science, vol 11675. Springer, Cham. DOI: 10.1007/978-3-030-26619-6_19.

  33. 2019 | Biology

    Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens.

    Loit K, Adamson K, Bahram M, Puusepp R, Anslan S, Kiiker R, Drenkhan R, Tedersoo L (2019). Applied and Environmental Microbiology, 85 (21):e01368-19. DOI: 10.1128/AEM.01368-19.

  34. 2019 | Chemistry

    On the Basicity of Organic Bases in Different Media.

    Tshepelevitsh, Sofja; Kütt, Agnes; Lõkov, Märt; Kaljurand, Ivari; Saame, Jaan; Heering, Agnes; Plieger, Paul G; Vianello, Robert; Leito, Ivo (2019). European Journal of Organic Chemistry, 2019 (40). DOI: 10.1002/ejoc.201900956

  35. 2019 | Computer science

    Stopping Redundancy Hierarchy Beyond the Minimum Distance.

    Yakimenka, Yauhen; Skachek, Vitaly; Bocharova, Irina E; Kudryashov, Boris D (2019). IEEE Transactions on Information Theory, 3724−3737. DOI: 10.1109/TIT.2018.2873140.

  36. 2019 | Biology

    Plant diversity in Oceanic archipelagos: realistic patterns emulated by an agent‐based computer simulation.

    Jõks, Madli; Pärtel, Meelis (2019). Ecography, 42 (4). DOI: 10.1111/ecog.03985.

  37. 2019 | Medical science

    Genetic variation in the Estonian population: pharmacogenomics study of adverse drug effects using electronic health records.

    Tasa T, Krebs K, Kals M, Mägi R, Lauschke VM, Haller T, Puurand T, Remm M, Esko T, Metspalu A, Vilo J, Milani L (2019). European Journal of Human Genetics, 27 (3):442−454. DOI: 10.1038/s41431-018-0300-6.

  38. 2019 | Chemistry

    Validation and extension of the gas‐phase superacidity scale.

    Leesment, Andre; Kaljurand, Ivari; Trummal, Aleksander; Kütt, Agnes; Netscher, Thomas; Bonrath, Werner; Leito, Ivo (2019). Rapid Commun Mass Spectrom, e8598. DOI: 10.1002/rcm.8598.

  39. 2019 | Chemistry

    Solute-solvent electronic interaction is responsible for initial charge separation in ruthenium complexes [Ru(bpy)3]2+ and [Ru(phen)3]2+.

    Stark, CW, Trummal, A, Uudsemaa, M et al (2019). Commun Chem 2, 108 (2019). DOI: 10.1038/s42004-019-0213-5.

  40. 2019 | Chemistry

    New oxacalix[4]arene carboxylate detects viologen in protic media.

    Peterson, Anna; Ludvig, Mari-Liis; Martõnova, Jevgenija; Kaabel, Sandra; Kerner, Paul; Uudsemaa, Merle; Trummal, Aleksander; Fomitšenko, Maria; Pehk, Tõnis; Aav, Riina; Adamson, Jasper (2019). Supramolecular Chemistry, 32 (5): 313-319. DOI: 10.1080/10610278.2019.1659269

  41. 2019 | Computer science

    Beyond temperature scaling: Obtaining well-calibrated multiclass probabilities with Dirichlet calibration.

    Kull, Meelis; Perello-Nieto, Miquel; Kängsepp, Markus; Filho, Telmo S; Song, Hao; Flach Peter (2019). NeurIPS 2019. DOI: 10.48550/arXiv.1910.12656.

  42. 2019 | Computer science

    Simplifying the Classification of App Reviews Using Only Lexical Features.

    Shah, FA; Sirts, K; Pfahl, D (2019). In: ICSOFT 2018. Communications in Computer and Information Science, vol 1077. Springer, Cham. https://doi.org/10.1007/978-3-030-29157-0_8.

  43. 2019 | Biology

    Analytical strategies to include the X‐chromosome in variance heterogeneity analyses: Evidence for trait‐specific polygenic variance structure.

    Deng, Wei Q; Mao, Shihong; Kalnapenkis, Anette; Esko, Tõnu; Mägi, Reedik; Pare, Guillaume; Sun, Lei (2019). Genetic Epidemiology, 43 (7). DOI: 10.1002/gepi.22247.

  44. 2019 | NLP

    Quality Estimation and Translation Metrics via Pre-trained Word and Sentence Embeddings.

    Yankovskaya, Elizaveta; Tättar, Andre; Fishel, Mark (2019). In Proceedings of the Fourth Conference on Machine Translation (Volume 3), pages 101–105. Association for Computational Linguistics. DOI: 10.18653/v1/W19-5410.

  1. 2018 | Biology

    The genetic ancestry of modern Indus Valley populations from Northwest India.

    Pathak, Ajai K; Kadian, Anurag; Kushniarevich, Alena; Montinaro, Francesco; Mondal, Mayukh; Ongaro, Linda; Singh, Manvendra et al (2018). The American Journal of Human Genetics, 103 (6):918-929. DOI: 10.1016/j.ajhg.2018.10.022.

  2. 2018 | Biology

    Ancient human parallel lineages within North America contributed to a coastal expansion.

    Scheib CL, Li H, Desai T, Link V, Kendall C, Dewar G, Griffith PW et al (2018). Science, 360 (6392):1024–1027. DOI: 10.1126/science.aar6851.

  3. 2018 | Biology

    Genes reveal traces of common recent demographic history for most of the Uralic-speaking populations.

    Tambets K, Yunusbayev B, Hudjashov G, Ilumäe AM, Rootsi S, Honkola T, Vesakoski O, Atkinson Q, et al (2018). Genome Biol 19 (1):139. DOI: 10.1186/s13059-018-1522-1

  4. 2018 | Biology

    Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding.

    Anslan S, Nilsson RH, Wurzbacher C, Baldrian P, Tedersoo L, Bahram M (2018). MycoKeys, 39:29-40. DOI: 10.3897/mycokeys.39.28109.

  5. 2018 | Chemistry

    Prediction of partition and distribution coefficients in various solvent pairs with COSMO-RS.

    Tshepelevitsh, Sofja; Hernits, Kertu; Leito, Ivo (2018). J Comput Aided Mol Des, 32 (6):711-722. DOI: 10.1007/s10822-018-0125-y.

  6. 2018 | NLP

    Quality Estimation with Force-Decoded Attention and Cross-lingual Embeddings.

    Yankovskaya, Elizaveta; Tättar, Andre, Fishel, Mark (2018). In: Proceedings of the Third Conference on Machine Translation: Shared Task Papers, pages 816–821. Association for Computational Linguistics.

  7. 2018 | NLP

    Low-Resource Translation Quality Estimation for Estonian.

    Yankovskaya, Elizaveta; Fishel, Mark (2018). In: Proceedings of the Eighth International Conference Baltic HLT 2018, pages 175-182. DOI: 10.3233/978-1-61499-912-6-175.

  8. 2018 | NLP

    Phrase-based Unsupervised Machine Translation with Compositional Phrase Embeddings.

    Del, Maksym; Tättar, Andre; Fishel, Mark (2018). In: Proceedings of the Third Conference on Machine Translation (WMT), Volume 2: Shared Task Papers. DOI: 10.18653/v1/W18-64034.

  9. 2018 | Chemistry

    Performance of SCAN density functional for a set of ionic liquid ion pairs.

    Karu, Karl; Mišin, Maksim; Ers, Heigo; Sun, Jianwei; Ivaništšev, Vladislav (2018). International Journal of Quantum Chemistry, 118 (13):e25582. DOI: 10.1002/qua.25582.

  10. 2018 | Chemistry

    NaRIBaS - A Scripting Framework for Computational Modeling of Nanomaterials and Room Temperature Ionic Liquids in Bulk and Slab.

    Roos Nerut, Eva; Karu, Karl; Voroshylova, Iuliia; Kirchner, Kathleen; Kirchner, Tom; Fedorov, Maxim; Ivaništšev, Vladislav (2018). Computation, 6, 57. DOI: 10.3390/computation6040057.

  11. 2018 | Medical science

    TAC-seq: targeted DNA and RNA sequencing for precise biomarker molecule counting.

    Teder, Hindrek; Koel, Mariann; Paluoja, Priit; Jatsenko, Tatjana; Rekker, Kadri; Laisk-Podar, Triin; Kukuškina, Viktorija; Velthut-Meikas, Agne; Fjodorova, Olga; Peters, Maire; Kere, Juha; Salumets, Andres; Palta, Priit; Krjutškov, Kaarel (2018). NPJ Genomic Medicine, 3:34. DOI: 10.1038/s41525-018-0072-5.

  12. 2018 | Medical science

    Whole exome sequencing of benign pulmonary metastasizing leiomyoma reveals mutation in the BMP8B gene.

    Sõritsa, D; Teder, H; Roosipuu, R; Tamm, H; Laisk-Podar, T; Soplepmann, P; Altraja, A; Salumets, A; Peters, M (2018). BMC Medical Genetics, 19 (1):20. DOI: 10.1186/s12881-018-0537-5.

  13. 2018 | Biology

    funcExplorer: a tool for fast data-driven functional characterisation of high-throughput expression data.

    Kolberg, Liis; Kuzmin, Ivan; Adler, Priit; Vilo, Jaak; Peterson, Hedi (2018). BMC Genomics, 19 (1):817. DOI: 10.1186/s12864-018-5176-x.

  14. 2018 | Medical science

    Large-scale meta-analysis highlights the hypothalamic-pituitary-gonadal axis in the genetic regulation of menstrual cycle length.

    Laisk T, Kukuškina V, Palmer D, Laber S, Chen CY, Ferreira T, Rahmioglu N, Zondervan K, Becker C, Smoller JW, Lippincott M, Salumets A, Granne I, Seminara S, Neale B, Mägi R, Lindgren CM (2018). Human Molecular Genetics, 27 (24):4323–4332. DOI: 10.1093/hmg/ddy317.

  15. 2018 | NLP

    Neural Morphological Tagging for Estonian.

    Tkachenko, Alexander; Sirts, Kairit (2018). In: Proceedings of the Eighth International Conference Baltic HLT 2018, pages 166-174. DOI: 10.48550/arXiv.1810.06908.

  16. 2018 | NLP

    Modeling Composite Labels for Neural Morphological Tagging.

    Tkachenko, Alexander; Sirts, Kairit (2018). In: Proceedings of the 22nd Conference on Computational Natural Language Learning, pages 368-379. DOI: 10.48550/arXiv.1810.08815.

  17. 2018 | Computer science

    Simple App Review Classification with Only Lexical Features.

    Shah, FA; Sirts, K; Pfahl, D. (2018). In: Proceedings of the 13th International Conference on Software Technologies, 2018, pages 112-119.

  18. 2018 | Computer science

    Activations of Deep Convolutional Neural Network are Aligned with Gamma Band Activity of Human Visual Cortex.

    Kuzovkin, Ilya; Vicente, Raul; Petton, Mathilde; Lachaux, Jean-Philippe; Baciu, Monica; Kahane, Philippe; Rheims, Sylvain; Vidal, Juan R; Aru, Jaan (2018). Communications Biology, 1:107. DOI: 10.1038/s42003-018-0110-y.

  1. 2017 | Biology

    FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads.

    Pajuste, Fanny-Dhelia; Kaplinski, Lauris; Möls, Märt; Puurand, Tarmo; Lepamets, Maarja; Remm, Maido (2017). Scientific Reports, 7 (1):2537. DOI: 10.1038/s41598-017-02487-5.

  2. 2017 | Computer science

    Outcome-Oriented Predictive Process Monitoring: Review and Benchmark.

    Teinemaa, Irene; Dumas, Marlon; La Rosa, Marcello; Maggi, Fabrizio M (2017). DOI: 10.48550/arXiv.1707.06766.

  3. 2017 | Medical science

    MixFit: Methodology for Computing Ancestry-Related Genetic Scores at the Individual Level and Its Application to the Estonian and Finnish Population Studies.

    Haller, Toomas; Leitsalu, Liis; Fischer, Krista; Nuotio, Marja-Liisa; Esko, Tõnu; Boomsma, Dorothea Irene; Kyvik, Kirsten Ohm; Spector, Tim D; Perola, Markus; Metspalu, Andres (2017). PLoS One, 12 (1):e0170325. DOI: 10.1371/journal.pone.0170325.

  4. 2017 | Medical science

    Pathogenic implications for autoimmune mechanisms derived by comparative eQTL analysis of CD4+ versus CD8+ T cells.

    Kasela, Silva; Kisand, Kai; Tserel, Liina; Kaleviste, Epp; Remm, Anu; Fischer, Krista; Esko, Tõnu; Westra, Harm-Jan; Fairfax, Benjamin P; Makino, Seiko; Knight, Julian C; Franke, Lude; Metspalu, Andres; Peterson, Pärt; Milani, Lili (2017). PLoS Genet, 13 (3):e1006643. DOI: 10.1371/journal.pgen.1006643.

  5. 2017 | Chemistry

    Hydrogen-Bond Donicity in DMSO and Gas Phase and Its Dependence on Brønsted Acidity.

    Tshepelevitch, Sofja; Trummal, Aleksander; Haav, Kristjan; Martin, Kerli; Leito, Ivo (2017). J Phys Chem A, 121 (1):357–369. DOI: 10.1021/acs.jpca.6b11115.

  6. 2017 | Chemistry

    On the Basicity of Conjugated Nitrogen Heterocycles in Different Media.

    Lõkov, Märt; Tshepelevitsh, Sofja; Heering, Agnes; Plieger, Paul G; Vianello, Robert; Leito, Ivo (2017). European Journal of Organic Chemistry, 2017 (30):4475-4489. DOI: 10.1002/ejoc.201700749.

  7. 2017 | Chemistry

    Method development for the analysis of resinous materials with MALDI-FT-ICR-MS: novel internal standards and a new matrix material for negative ion mode.

    Teearu, A; Vahur, S; Rodima, T; Herodes, K; Bonrath, W; Netscher, T; Tshepelevitsh, S; Trummal, A; Lõkov, M; Leito, I (2017). J. Mass Spectrom, 52 (9):603-617. DOI: 10.1002/jms.3943.

  8. 2017 | Biology

    Exploring Selectivity of 22 Acyclic Urea-, Carbazole- and Indolocarbazole-Based Receptors towards 11 Monocarboxylates.

    Martin, Kerli; Nõges, Juuli; Haav, Kristjan; Kadam, Sandip A; Pung, Astrid; Leito, Ivo (2017). European Journal of Organic Chemistry, 2017 (35):5231–5237. DOI: 10.1002/ejoc.201700931.

  9. 2017 | Chemistry

    Predicting Relative Stability of Conformers in Solution with COSMO-RS.

    Pung, Astrid; Leito, Ivo (2017). J. Phys. Chem. A, 121 (36):6823-6829. DOI: 10.1021/acs.jpca.7b05197.

  10. 2017 | Chemistry

    Multidentate Anion Receptors for Binding Glyphosate Dianion: Structure and Affinity.

    Kadam, Sandip A; Haav, Kristjan; Toom, Lauri; Pung, Astrid; Mayeux, Charly; Leito, Ivo (2017). European Journal of Organic Chemistry, 2017 (11):1396–1406. DOI: 10.1002/ejoc.201601583.

  11. 2017 | Medical science

    Personalized risk prediction for type 2 diabetes: the potential of genetic risk scores.

    Läll, Kristi; Mägi, Reedik; Morris, Andrew; Metspalu, Andres; Fischer, Krista (2017). Genetics in Medicine, 19 (3):322-329. DOI: 10.1038/gim.2016.103.

  1. 2016 | Computer science

    On Failing Sets of the Interval-Passing Algorithm for Compressed Sensing.

    Yakimenka, Yauhen; Rosnes, Eirik (2016). 54th Annual Allerton Conference on Communication, Control, and Computing (Allerton). DOI: 10.48550/arXiv.1607.05001.

  2. 2016 | Biology

    Evaluation of traditionally circumscribed species in the lichen-forming genus Usnea, section Usnea (Parmeliaceae, Ascomycota) using a six-locus dataset.

    Mark, Kristiina; Saag, Lauri; Leavitt, Steven D; Will-Wolf, Susan; Nelsen, Matthew P; Tõrra, Tiiu; Saag, Andres; Randlane, Tiina; Lumbsch, Thorsten H (2016). Organisms Diversity & Evolution, 16, 497−524. DOI: 10.1007/s13127-016-0273-7.

  3. 2016 | Biology

    Human Y Chromosome Haplogroup N: A Non-trivial Time-Resolved Phylogeography that Cuts across Language Families.

    Ilumäe, Anne-Mai; Reidla, Maere; Chukhryaeva, Marina; Järve, Mari; Post, Helen; Karmin, Monika; Saag, Lauri; Agdzhoyan, Anastasiya; Kushniarevich, Alena; Litvinov, Sergey; Ekomasova, Natalya; Tambets, Kristiina et al (2016). American Journal of Human Genetics, 99 (1):163−173. DOI: 10.1016/j.ajhg.2016.05.025.

  4. 2016 | Biology

    A recent bottleneck of Y chromosome diversity coincides with a global change in culture.

    Karmin M, Saag L, Vicente M, Wilson Sayres MA, Järve M, Talas UG, Rootsi S, Ilumäe AM, Mägi R, et al (2015). Genome Research, 25(4):459-66. DOI: 10.1101/gr.186684.114.

  5. 2016 | Chemistry

    Computational modeling of acrylodan-labeled cAMP dependent protein kinase catalytic subunit unfolding.

    Kuznetsov, Aleksei; Kivi, Rait; Järv, Jaak (2016). Computational Biology and Chemistry, 61:197-201. DOI: 10.1016/j.compbiolchem.2016.01.004.

  6. 2016 | Chemistry

    Reaction kinetics and solubility in water-organic binary solutions are governed by similar solvation equilibria.

    Salmar, Siim; Vaalma, Morten; Vider, Henry; Tenno, Tiina; Kuznetsov, Aleksei; Järv, Jaak; Tuulmets, Ants (2016). Journal of Physical Organic Chemistry, 29 (3):118−126. DOI: 10.1002/poc.3507.

  7. 2016 | Medical science

    Epigenetic profiling in CD4+ and CD8+ T cells from Graves’ disease patients reveals changes in genes associated with T cell receptor signaling.

    Limbach, Maia; Saare, Mario; Tserel, Liina; Kisand, Kai; Eglit, Triin; Sauer, Sacha; Axelsson, Tomas; Syvänen, Ann-Christine; Metspalu, Andrus; Milani, Lili; Peterson, Pärt (2016). Journal of Autoimmunity, 67:46-56. DOI: 10.1016/j.jaut.2015.09.006.

  8. 2016 | Chemistry

    Electrochemical Investigation of 1-Ethyl-3-methylimidazolium Bromide and Tetrafluoroborate Mixture at Bi (111) Electrode Interface.

    Siimenson, C; Lembinen, M; Oll, O; Läll, L; Tarkanovskaja, M; Ivaništšev, V; Siinor, L; Thomberg, T; Lust, K; Lust, E (2016). Journal of The Electrochemical Society, 163 (9):H723-H730. DOI: 10.1149/2.0111609jes.

  9. 2016 | Chemistry

    Interplay between the hydrophilicity of metal electrodes and their interfacial capacitance.

    Ruzanov, Anton; Karu, Karl; Ivaništšev, Vladislav; Nazmutdinov, Renat R; Lust, Enn (2016). Electrochimica Acta, 210:615–621. DOI: 10.1016/j.electacta.2016.05.110.

  10. 2016 | Chemistry

    Self-interaction error in DFT-based modelling of ionic liquids.

    Lage-Estebanez, Isabel; Ruzanov, Anton; de la Vega, Jose MG; Fedorov, Maxim V; Ivaništšev, Vladislav B (2016). Phys. Chem. Chem. Phys, 18 (3):2175–2182. DOI: 10.1039/C5CP05922D.

  11. 2016 | Chemistry

    Predictions of Physicochemical Properties of Ionic Liquids with DFT.

    Karu K, Ruzanov A, Ers H, Ivaništšev V, Lage-Estebanez I, García de la Vega JM (2016). Computation, 4 (3):25. DOI: 10.3390/computation4030025.

  12. 2016 | Medical science

    Cortical thickness and surface area correlates with cognitive dysfunction among first-episode psychosis patients.

    Haring L, Müürsepp A, Mõttus R, Ilves P, Koch K, Uppin K, Tarnovskaja J, Maron E, Zharkovsky A, Vasar E, Vasar V (2016). Psychol Med, 46 (10):2145-55. DOI: 10.1017/S0033291716000684.

  13. 2016 | Chemistry

    Experimental Basicities of Phosphazene, Guanidinophosphazene, and Proton Sponge Superbases in the Gas Phase and Solution.

    Kaljurand, Ivari; Saame, Jaan; Rodima, Toomas; Koppel, Ivar; Koppel, Ilmar A; Kögel, Julius F; Sundermeyer, Jörg; Köhn, Uwe; Coles, Martyn P; Leito, Ivo (2016). Journal of Physical Chemistry A, 120 (16):2591−2604. DOI: 10.1021/acs.jpca.6b01552.

  14. 2016 | Physics

    Electron-phonon interaction within classical molecular dynamics.

    Tamm, A; Samolyuk, G; Correa, AA; Klintenberg, M; Aabloo, A; Caro, A (2016). Physical Review B, 94 (2). DOI: 10.1103/PhysRevB.94.024305.

  15. 2016 | Material science

    Optimizing the design of 3D-pillar microbatteries using finite element modelling.

    Priimägi, Priit; Brandell, Daniel; Srivastav, Shruti; Aabloo, Alvo; Kasemägi, Heiki; Zadin, Vahur (2016). Electrochimica Acta, 209 (10):138–148. DOI: 10.1016/j.electacta.2016.05.047.

  16. 2016 | Chemistry

    NMR and DFT Study of the Copper(I)-Catalyzed Cycloaddition Reaction: H/D Scrambling of Alkynes and Variable Reaction Order of the Catalyst.

    Kalvet, I; Tammiku-Taul, J; Mäeorg, U; Tämm, K; Burk, P; Sikk, L (2016). ChemCatChem, 8 (10):1804−1808 DOI: 10.1002/cctc.201600176.

  17. 2016 | Chemistry

    Parametrization of nanoparticles: development of full-particle nanodescriptors.

    Tämm, K; Sikk, L; Burk, J; Rallo, R; Pokhrel, S; Mädler, L; Scott-Fordsmand, JJ; Burk, P; Tamm, T (2016). Nanoscale, 8 (36):16243-16250. DOI: 10.1039/c6nr04376c.

  18. 2016 | Chemistry

    Relative stability and proton transfer reactions of unsaturated isocyanides and cyanides.

    Adamson, Aiko; Kaljurand, Ivari; Guillemin, Jean-Claude; Burk, Peeter (2016). Journal of Physical Organic Chemistry, 29 (9):452-459. DOI: 10.1002/poc.3562.

  19. 2016 | Biology

    Robust Modeling and Scaffold Hopping: Case Study based on HIV Reverse Transcriptase Inhibitors Type-1 Data.

    Pillai, GG; Mederos, L; Panda, CS; Gronski, A; Burk, P; Hall, CD; Katritzky, AR; Tämm, K; Karelson, M (2016). Medicinal Chemistry, 12 (6):513-26. DOI: 10.2174/1573406411666151005110141.

  20. 2016 | Biology

    The paternal ancestry of Uttarakhand does not imitate the classical caste system of India.

    Negi N, Tamang R, Pande V, Sharma A, Shah A, Reddy AG, Vishnupriya S, Singh L, Chaubey G, Thangaraj K (2016). J Hum Genet, 61 (2):167-72. DOI: 10.1038/jhg.2015.121.

  21. 2016 | Biology

    Multi-layered population structure in Island Southeast Asians.

    Mörseburg A, Pagani L, Ricaut FX, Yngvadottir B, Harney E, Castillo C, Hoogervorst T, Antao T, Kusuma P, Brucato N, Cardona A, Pierron D, Letellier T, Wee J, Abdullah S, Metspalu M, Kivisild T (2016). Eur J Hum Genet, 24 (11):1605-1611. DOI: 10.1038/ejhg.2016.60.

  22. 2016 | Biology

    Malagasy Genetic Ancestry Comes from an Historical Malay Trading Post in Southeast Borneo.

    Brucato N, Kusuma P, Cox MP, Pierron D, Purnomo GA, Adelaar A, Kivisild T, Letellier T, Sudoyo H, Ricaut FX (2016). Mol Biol Evol, 33 (9):2396-400. DOI: 10.1093/molbev/msw117.

  23. 2016 | Biology

    HybriFree: a robust and rapid method for the development of monoclonal antibodies from different host species.

    Kivi G, Teesalu K, Parik J, Kontkar E, Ustav M Jr, Noodla L, Ustav M, Männik A (2016). BMC Biotechnology, 16:2. DOI: 10.1186/s12896-016-0232-6.

  24. 2016 | Biology

    Genetic heritage of Croatians in the Southeastern European gene pool-Y chromosome analysis of the Croatian continental and Island population.

    Šarac J; Šaric T; Havaš Auguštin D; Novokmet N; Vekaric N; Mustac M; Grahovac B; Kapovic M; Nevajda B; Glasnovic A; Missoni S; Rootsi S; Rudan P (2016). Am J Hum Biol, 28 (6):837-845. DOI: 10.1002/ajhb.22876.

  25. 2016 | Biology

    Genetic affinities of the Jewish populations of India.

    Chaubey G; Singh M; Rai N; Kariappa M; Singh K; Singh A; Pratap Singh D; Tamang R; Selvi Rani D; Reddy AG; Kumar Singh V; Singh L; Thangaraj K (2016). Sci Rep, 6:19166. DOI: 10.1038/srep19166.

  26. 2016 | Biology

    East Eurasian ancestry in the middle of Europe: genetic footprints of Steppe nomads in the genomes of Belarusian Lipka Tatars.

    Pankratov V, Litvinov S, Kassian A, Shulhin D, Tchebotarev L, Yunusbayev B, Möls M, Sahakyan H, Yepiskoposyan L, et al (2016). Sci Rep, 6:30197. DOI: 10.1038/srep30197.

  27. 2016 | Biology

    Dissecting the influence of Neolithic demic diffusion on Indian Y-chromosome pool through J2-M172 haplogroup.

    Singh S, Singh A, Rajkumar R, Sampath Kumar K, Kadarkarai Samy S, Nizamuddin S, Singh A, Ahmed Sheikh S, Peddada V, Khanna V, Veeraiah P, Pandit A, Chaubey G, Singh L, Thangaraj K (2016). Sci Rep, 6:19157. DOI: 10.1038/srep19157.

  28. 2016 | Medical science

    Copy number variation analysis detects novel candidate genes involved in follicular growth and oocyte maturation in a cohort of premature ovarian failure cases.

    Tšuiko O, Nõukas M, Žilina O, Hensen K, Tapanainen JS, Mägi R, Kals M, Kivistik PA, Haller-Kikkatalo K, Salumets A, Kurg A (2016). Hum Reprod, 31 (8):1913-25. DOI: 10.1093/humrep/dew142.

  29. 2016 | Medical science

    Single base resolution analysis of 5-hydroxymethylcytosine in 188 human genes: implications for hepatic gene expression.

    Ivanov M, Kals M, Lauschke V, Barragan I, Ewels P, Käller M, Axelsson T, Lehtiö J, Milani L, Ingelman-Sundberg M (2016). Nucleic Acids Research, 44 (14):6756-69. DOI: 10.1093/nar/gkw316.

  30. 2016 | Medical science

    Whole-exome sequencing identifies a potential TTN mutation in a multiplex family with inguinal hernia.

    Mihailov E, Nikopensius T, Reigo A, Nikkolo C, Kals M, Aruaas K, Milani L, Seepter H, Metspalu A (2016). Hernia, 21 (1):95-100. DOI: 10.1007/s10029-016-1491-9.

  31. 2016 | Biology

    Imprinted genes and imprinting control regions show predominant intermediate methylation in adult somatic tissues.

    Pervjakova N, Kasela S, Morris AP, Kals M, Metspalu A, Lindgren CM, Salumets A, Mägi R (2016). Epigenomics, 8 (6):789-99. DOI: 10.2217/epi.16.8.

  32. 2016 | Biology

    RNA-sequencing of WFS1-deficient pancreatic islets.

    Ivask, Marilin; Hugill, Alison; Kõks Sulev (2016). Physiol Rep, 4 (7):e12750. DOI: 10.14814/phy2.12750.

  33. 2016 | Biology

    Large-scale dark diversity estimates: new perspectives with combined methods.

    Ronk, Argo; de Bello, Francesco; Fibich, Pavel; Pärtel, Meelis (2016). Ecology and Evolution, 6 (17): 6266-81. DOI: 10.1002/ece3.2371.

  34. 2016 | Medical science

    Grey matter abnormalities in methcathinone abusers with a Parkinsonian syndrome.

    Juurmaa, J; Menke, RAL; Vila, P; Müürsepp, A; Tomberg, T; Ilves, P; Nigul, M; Johansen-Berg, H; Donaghy, M; Stagg, CJ; Stepens, A; Taba, P (2016), Brain and Behavior, 6 (11):e00539. DOI: 10.1002/brb3.539.

  35. 2016 | Chemistry

    The Thermodynamic Stability of Adamantylideneadamantane and Its Proton-and Electron-Exchanges. Comparison with Simple Alkenes.

    Abboud, Jose-Luis M; Alkorta, Ibon; Davalos, Juan Z; Koppel, Ilmar A; Koppel, Ivar; Lenoir, Dieter; Martinez, Sonia; Mishima, Masaaki (2016). Bulletin of the Chemical Society of Japan, 89 (7):762–769. DOI: 10.1246/bcsj.20160026.

  36. 2016 | Chemistry

    Acidity of Strong Acids in Water and Dimethyl Sulfoxide.

    Trummal, Aleksander; Lipping, Lauri; Kaljurand, Ivari; Koppel, Ilmar; Leito, Ivo (2016). The Journal of Physical Chemistry A, 120 (20):3663−3669. DOI: 10.1021/acs.jpca.6b02253.

  37. 2016 | Biology

    Genomic analyses inform on migration events during the peopling of Eurasia.

    Pagani, Luca; Lawson, Daniel John; Jagoda, Evelyn; Mörseburg, Alexander; Eriksson, Anders; Mitt, Mario; Clemente, Florian; Hudjashov, Georgi; DeGiorgio, Michael; Saag, Lauri, et al (2016). Nature, 538 (7624):238-242. DOI: 10.1038/nature19792.

  38. 2016 | Medical science

    Ultra-rare disruptive and damaging mutations influence educational attainment in the general population.

    Ganna, Andrea; Genovese, Giulio; Howrigan, Daniel P; Byrnes, Andrea; Kurki, Mitja; Zekavat, Seyedeh M; Whelan, Christopher W; Kals, Mart et al (2016). Nature Neuroscience, 19 (12):1563−1565. DOI: 10.1038/nn.4404.

  39. 2016 | Medical science

    Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms.

    Michael Guoa H, Satish Nandakumar K, Jacob Ulirsch C, Seyedeh Zekavat M, Jason Buenrostro D, Pradeep Natarajan, Rany Salem, Roberto Chiarle, Mario Mitt, Mart Kals, Kalle Pärn, Krista Fischer, Lili Milani, Reedik Mägi, et al (2016). Proc Natl Acad Sci USA, 114 (3):E327-E336. DOI: 10.1073/pnas.1619052114.

  1. 2015 | Biology

    A recent bottleneck of Y chromosome diversity coincides with a global change in culture.

    Karmin M, Saag L, Vicente M, Wilson Sayres MA, Järve M, Talas UG, Rootsi S, Ilumäe AM, Mägi R, Mitt M, Pagani L, Puurand T, et al (2015). Genome Research, 25 (4):459-66. DOI: 10.1101/gr.186684.114.

  2. 2015 | Chemistry

    Basicity Limits of Neutral Organic Superbases.

    Leito, Ivo; Koppel, Ilmar; Koppel, Ivar; Kaupmees, Karl; Tshepelevitsh, Sofja; Saame, Jaan (2015). Angewandte Chemie - International Edition in English, 54 (32):9262-5. DOI: 10.1002/anie.201503345.

  3. 2015 | Chemistry

    Solution and Gas-Phase Acidities of all-trans (all-E) Retinoic Acid: An Experimental and Computational Study.

    Abboud, Jose-Luis M; Koppel, Ilmar A; Uggerud, Einar; Leito, Ivo; Koppel, Ivar; Sekiguchi, Osamu; Kaupmees, Karl; Saame, Jaan; Kütt, Karl; Mishima, Masaaki (2015). Chemistry – A European Journal, 21 (31):11238-43. DOI: 10.1002/chem.201500717.

  4. 2015 | Chemistry

    Superacidity of Closo-Dodecaborate-Based Brönsted Acids:a DFT Study.

    Lipping, l; Leito, I; Koppel, I; Krossing, I; Himmel, H; Koppel, IA (2015). Journal of Physical Chemistry A, 119 (4):735-43. DOI: 10.1021/jp506485x.

  5. 2015 | Biology

    Bovine sperm plasma membrane proteomics through biotinylation and subcellular enrichment.

    Kasvandik, Sergo; Sillaste, Gerly; Velthut-Meikas, Agne; Mikelsaar, Aavo-Valdur; Hallap, Triin; Padrik, Peeter; Tenson, Tanel; Jaakma, Ülle; Kõks, Sulev; Salumets, Andres (2015). Proteomics, 15 (11):1906-1920. DOI: 10.1002/pmic.201400297.

  6. 2015 | Physics

    Near threshold photodissociation study of EMIMBF4 vapor.

    Kuusik, Ivar; Tarkanovskaja, Marta; Kruusma, Jaanus; Reedo, Valter; Välbe, Raul; Lõhmus, Ants; Kisand, Vambola; Lust, Enn; Kukk, Edwin; Nõmmiste, Ergo (2015). RSC Advances, 9, 6834−6842. DOI: 10.1039/C4RA12775G.

  7. 2015 | Biology

    RegScan: a GWAS tool for quick estimation of allele effects on continuous traits and their combinations.

    Haller, Toomas; Kals, Mart; Esko, Tõnu; Mägi, Reedik; Fischer, Krista (2015). Brief Bioinform, 16(1):39-44. DOI: 10.1093/bib/bbt066.

  8. 2015 | Biology

    The Genetic Legacy of the Expansion of Turkic-Speaking Nomads across Eurasia.

    Yunusbayev B, Metspalu M, Metspalu E, Valeev A, Litvinov S, Valiev R, et al (2015). PLoS Genet, 11 (4):e1005068. DOI: 10.1371/journal.pgen.1005068.

  9. 2015 | Biology

    Y-Chromosomal Lineages of Latvians in the Context of the Genetic Variation of the Eastern-Baltic Region.

    Pliss L, Timša L, Rootsi S, Tambets K, Pelnena I, Zole E, Puzuka A, Sabule A, Rozane S, Lace B, Kucinskas V, Krumina A, Ranka R, Baumanis V (2015). Ann Hum Genet, 79 (6):418-30. DOI: 10.1111/ahg.12130.

  10. 2015 | Biology

    The phylogenetic and geographic structure of Y-chromosome haplogroup R1a.

    Underhill PA, Poznik GD, Rootsi S, Järve M, Lin AA, Wang J, Passarelli B, Kanbar J, Myres NM, King RJ, Di Cristofaro J, Sahakyan H, Behar DM, et al (2015). Eur J Hum Genet, 23 (1):124-31. DOI: 10.1038/ejhg.2014.50.

  11. 2015 | Biology

    RegScan: a GWAS tool for quick estimation of allele effects on continuous traits and their combinations.

    Haller, Toomas; Kals, Mart; Esko, Tõnu; Mägi, Reedik; Fischer, Krista (2015). Brief Bioinform, 16 (1): 39–44. DOI: 10.1093/bib/bbt066.

  12. 2015 | Biology

    Population genomics of Bronze Age Eurasia.

    Allentoft ME, Sikora M, Sjögren KG, Rasmussen S, Rasmussen M, Metspalu M, Saag L, et al (2015). Nature, 522 (7555):167-72. DOI: 10.1038/nature14507.

  13. 2015 | Biology

    POPULATION GENETICS. Genomic evidence for he Pleistocene and recent population history of Native Americans.

    Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, et al (2015). Science. 349 (6250):aab3884. DOI: 10.1126/science.aab3884.

  14. 2015 | Medical science

    Polymorphic variants near 1p22 and 20q11.2 loci and the risk of non-syndromic cleft lip and palate in South Indian population.

    Babu Gurramkonda V, Hussain Syed A, Murthy J, Chaubey G, Bhaskar Lakkakula VK (2015). Int J Pediatr Otorhinolaryngol, 79 (12):2389-93. DOI: 10.1016/j.ijporl.2015.10.055.

  15. 2015 | Biology

    Global diversity, population stratification, and selection of human copy number variation.

    Sudmant PH, Sahakyan H, Kivisild T, Metspalu E, Parik J, Villems R, Metspalu M, et al (2015). Science, 349 (6253):aab3761. DOI: 10.1126/science.aab3761.

  16. 2015 | Biology

    Genetic Heritage of the Balto-Slavic Speaking Populations: A Synthesis of Autosomal, Mitochondrial and Y-Chromosomal Data.

    Kushniarevich A, Metspalu E, Reidla M, Tambets K, Tamm E, Metspalu M, Kivisild T, Villems R, et al (2015). PLoS One, 10 (9):e0135820. DOI: 10.1371/journal.pone.0135820.

  17. 2015 | Biology

    Genetic Affinity of the Bhil, Kol and Gond Mentioned in Epic Ramayana.

    Chaubey G, Kadian A, Bala S, Rao VR (2015). PLoS One, 10 (6):e0127655. DOI: 10.1371/journal.pone.0127655.

  18. 2015 | Biology

    Gene Pool Similarities and Differences between Ukrainians and Russians of Slobozhanshchina on Y-Chromosome Data.

    Utevska OM, Pshenichnov AS, Dibirova Kh D, Rootsi S, Agdzhoyan AT, Churnosov MI, Balanovska EV, Atramentova LA, Balanovsky OP (2015). Cytology and Genetics, 49 (4):40-50.

  19. 2015 | Biology

    Fine Dissection of Human Mitochondrial DNA Haplogroup HV Lineages Reveals Paleolithic Signatures from European Glacial Refugia.

    De Fanti S, Barbieri C, Sarno S, Sevini F, Vianello D, Tamm E, Metspalu E, van Oven M, Hübner A, Sazzini M, Franceschi C, Pettener D, Luiselli D (2015). PLoS One, 10 (12):e0144391. DOI: 10.1371/journal.pone.0144391.

  20. 2015 | Biology

    Evaluating the genetic impact of South and Southeast Asia on the peopling of Bangladesh.

    Sultana GN, Sharif MI, Asaduzzaman M, Chaubey G (2015). Leg Med (Tokyo). 17 (6):446-50. DOI: 10.1016/j.legalmed.2015.09.004.

  21. 2015 | Biology

    Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago.

    Rasmussen S, Allentoft ME, Nielsen K, Orlando L, Sikora M, Sjögren KG, Pedersen AG, Schubert M, Van Dam A, Kapel CM, Nielsen HB, Brunak S, Avetisyan P, Epimakhov A, Khalyapin MV, Gnuni A, Kriiska A, Lasak I, Metspalu M, et al (2015). Cell, 163 (3):571-82. DOI: 10.1016/j.cell.2015.10.009.

  22. 2015 | Medical science

    Transcriptional landscape of psoriasis identifies the involvement of IL36 and IL36RN.

    Keermann M, Kõks S, Reimann E, Prans E, Abram K, Kingo K (2015). BMC Genomics, 16 (1):322. DOI: 10.1186/s12864-015-1508-2.

  23. 2015 | Medical science

    Expression of IL-36 family cytokines and IL-37 but not IL-38 is altered in psoriatic skin.

    Keermann M, Kõks S, Reimann E, Abram K, Erm T, Silm H, Kingo K (2015). J Dermatol Sci, 80 (2):150-2. DOI: 10.1016/j.jdermsci.2015.08.002.

  24. 2015 | Medical science

    Smoking-induced expression of the GPR15 gene indicates its potential role in chronic inflammatory pathologies.

    Kõks G, Uudelepp ML, Limbach M, Peterson P, Reimann E, Kõks S (2015). Am J Pathol, 187 (11):2898-906. DOI: 10.1016/j.ajpath.2015.07.006.

  25. 2015 | Biology

    Applying the dark diversity concept to plants at the European scale.

    Ronk, Argo; Szava-Kovats, Robert; Pärtel, Meelis (2015). Ecography, 38 (10):1015-1025. DOI: 10.1111/ecog.01236.

  26. 2015 | Chemistry

    A kinetic view of the mechanism of the Grignard reaction with alkoxysilanes.

    Ploom, Anu; Tuulmets, Ants; Panov, Dmitri; Burk, Peeter (2015). Phosphorus, sulfur, and silicon and the related elements, 190 (4):509−519. DOI: 10426507.2014.952002.

  27. 2015 | Chemistry

    Effect of strain on gas-phase basicity of (E)-1-methyl-2-(1-methyl-2-adamantylidene) adamantane.

    Kekišev, Ott; Kaljurand, Ivari; Toom, Lauri; Lenoir, Dieter; Burk, Peeter; Järv, Jaak (2015). Journal of Physical Organic Chemistry, 28 (7):447−451. DOI: 10.1002/poc.3435.

  28. 2015 | Chemistry

    Proton transfer reactions of hydrazine-boranes.

    Adamson, Aiko; Guillemin, Jean-Claude; Burk, Peeter (2015). Journal of Physical Organic Chemistry, 28 (4):244−249. DOI: 10.1002/poc.3401.

  29. 2015 | Biology

    Theoretical Modeling of HPV: QSAR and Novodesign with Fragment Approach.

    Pillai, Girinath G; Sikk, Lauri; Tamm, Tarmo; Karelson, Mati; Burk, Peeter; Tamm, Kaido (2015). Current Computer Aided-Drug Design, 10 (4):303−314. DOI: 10.2174/1574886309666141126145756.

  30. 2015 | Chemistry

    Towards the Discrimination of Carboxylates by Hydrogen-Bond Donor Anion Receptors.

    Kadam, Sandip A; Martin, Kerli; Haav, Kristjan; Toom, Lauri; Mayeux, Charly; Pung, Astrid; Gale, Philip, A; Hiscock, Jennifer R; Brooks, Simon J; Kirby, Isabelle L; Busschaert, Nathalie; Leito, Ivo (2015). Chemistry – A European Journal, 21 (13):5145−5160. DOI: 10.1002/chem.201405858.

  31. 2015 | Chemistry

    Conformational Switching of a Foldamer in a Multicomponent System by pH-Filtered Selection between Competing Noncovalent Interactions.

    Brioche, Julien; Pike, Sarah; Tshepelevitsh, Sofa; Leito, Ivo; Morris, Gareth A; Webb, Simon J; Clayden, Jonathan (2015). Journal of the American Chemical Society, 137 (20):6680−6691. DOI: 10.1021/jacs.5b03284.

  1. 2014 | Biology

    85 Low-Molecular-Weight Metabolites In Bovine In Vitro Production Culture Media As Embryo Quality Markers.

    Nomm, Monika; Mark, Elina; Kilk, Kalle; Koks, Sulev; Jaakma, Ulle (2014). In: Reproduction, Fertility and Development 27 (1):135-136. DOI: 10.1071/RDv27n1Ab85.

  2. 2014 | Biology

    Unravelling the distinct strains of Tharu ancestry.

    Chaubey G, Singh M, Crivellaro F, Tamang R, Nandan A, Singh K, Sharma VK, Pathak AK, Shah AM, et al (2014). European Journal of Human Genetics, 22 (12):1404-12. DOI: 10.1038/ejhg.2014.36.

  3. 2014 | Physics

    GoWo band structure of CdWO4.

    Laasner, Raul (2014). J. Phys. Condens. Matter, 26 (12):125503. DOI: 10.1088/0953-8984/26/12/125503.

  4. 2014 | Biology

    Standing at the Gateway to Europe – The Genetic Structure of Western Balkan Populations Based on Autosomal and Haploid Markers.

    Kovacevic L, Tambets K, Ilumäe AM, Kushniarevich A, Yunusbayev B, Solnik A, Bego T, Primorac D, Skaro V, et al (2014). PLoS One, 9 (8):e105090. DOI: 10.1371/journal.pone.0105090.

  5. 2014 | Biology

    The genome of a Late Pleistocene human from a Clovis burial site in western Montana.

    Rasmussen M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford TW Jr, Rasmussen S, Moltke I, et al (2014). Nature, 506 (7487):225-229. DOI: 10.1038/nature13025.

  6. 2014 | Chemistry

    Influence of Redoping on Electrochemical Properties of the Polypyrrole films.

    Raudsepp, Terje; Marandi, Margus; Sammelselg, Väino; Tamm, Tarmo; Tamm, Jüri (2014). Electrochimica Acta, 122. DOI: 10.1016/j.electacta.2013.08.083.

  7. 2014 | Medical science

    Parkinson’s disease in GTP cyclohydrolase 1 mutation carries.

    Mencacci, NE; Isaias, IU; Reich, MM; Ganos, C; Plagnol, V; Polke, JM; Bras, J; Hersheson, J; Stamelou, M; Pittman, AM; Noyce, AJ; Mok, KY; Opladen, T; Kunstmann, E, et al (2014). Brain, 137 (Pt 9):2480-92. DOI: 10.1093/brain/awu179.

  8. 2014 | Biology

    Melanocytes in the skin – comparative whole transcriptome analysis of main skin cell types.

    Reemann, P; Reimann, E; Ilmjärv, S; Porosaar, O; Silm, H; Jaks, V; Vasar, E; Kingo, K; Kõks, S (2014). PLoS ONE, 9(12), e115717. DOI: 10.1371/journal.pone.0115717.

  9. 2014 | Biology

    Sequencing and annotated analysis of full genome of Holstein breed bull.

    Kõks, S; Reimann, E; Lilleoja, R; Lättekivi, F; Salumets, A; Reemann, P; Jaakma, Ü (2014). Mammalian genome, 25 (7-8):363-373. DOI: 10.1007/s00335-014-9511-5.

  10. 2014 | Medical science

    Whole exome sequencing of a single osteosarcoma case – integrative analysis with whole transcriptome RNA-seq data.

    Reimann, Ene; Kõks, Sulev; Ho, Xuan; Maasalu, Katre; Märtson, Aare (2014). Human Genomics, 8 (20):20. DOI: 10.1186/s40246-014-0020-0.

  11. 2014 | Medical science

    Comparison of the metabolic syndrome risk in valproate-treated patients with epilepsy and the general population in Estonia.

    Rakitin, A; Eglit, T; Kõks, S; Lember, M; Haldre, S (2014). PLoS ONE, 9 (7), e103856. DOI: 10.1371/journal.pone.0103856.

  12. 2014 | Medical science

    Using RNA sequencing for identifying gene imprinting and random monoallelic expression in human placenta.

    Metsalu, Tauno; Viltrop, Triin; Tiirats, Airi; Rajashekar, Balaji; Reimann, Ene; Kõks, Sulev; Rull, Kristiina; Milani, Lili; Acharya, Ganesh; Basnet, Purusotam; Vilo, Jaak; Mägi, Reedik; Metspalu, Andres; Peters, Maire; Haller-Kikkatalo, Kadri; Salumets, Andres (2014). Epigenetics, 9 (10):1397-1409. DOI: 10.4161/15592294.2014.970052.

  13. 2014 | Medical science

    Energy metabolism and thyroid function of mice with deleted wolfram in (Wfs1) gene.

    Noormets, Klari; Kõks, Sulev; Ivask, Marilin; Aunapuu, Marina; Arend, Andres; Vasar, Eero; Tillmann, Vallo (2014). Experimental and Clinical Endocrinology of Diabetes, 122 (5):281-286. DOI: 10.1055/s-0034-1372582.

  14. 2014 | Medical science

    Effect of Chronic Valproic Acid Treatment on Hepatic Gene Expression Profile in Wfs1 Knockout Mouse.

    Punapart, Marite; Eltermaa, Mall; Oflijan, Julia; Sütt, Silva; Must, Anne; Kõks, Sulev; Schalkwyk, Leonard C; Fernandes, Catherine; Vasar, Eero; Soomets, Ursel; Terasmaa, Anton (2014). PPAR Research, 2014:349525. DOI: 10.1155/2014/349525.

  15. 2014 | Biology

    Trib3 is developmentally and nutritionally regulated in the brain but is dispensable for spatial memory, fear conditioning and sensing of amino acid-imbalanced diet.

    Örd, Tiit; Innos, Jürgen; Lilleväli, Kersti; Tekko, Triin; Sütt, Silva; Örd, Daima; Kõks, Sulev; Vasar, Eero; Örd, Tõnis (2014). PLoS ONE, 9 (4):e94691. DOI: 10.1371/journal.pone.0094691.

  16. 2014 | Medical science

    Whole Transcriptome Analysis (RNA Sequencing) of Peripheral Blood Mononuclear Cells of Vitiligo Patients.

    Reimann, Ene; Kingo, Külli; Karelson, Maire; Reemann, Paula; Vasar, Eero; Silm, Helgi; Kõks, Sulev (2014). Dermatopathology, 1 (1):11-23. DOI: 10.1159/000357402.

  17. 2014 | Medical science

    Expression of Class II Cytokine Genes in Children’s Skin.

    Reemann, P; Reimann, E; Suutre, S; Paavo, M; Loite, U; Porosaar, O; Abram, K; Silm, H; Vasar, E; Kõks, S; Kingo, K (2014). Acta Dermato-Venereologica, 94 (4):386-392. DOI: 10.2340/00015555-1717.

  18. 2014 | Medical science

    Whole exome sequencing of a single osteosarcoma case – integrative analysis with whole transcriptome RNA-seq data.

    Reimann E, Kõks S, Ho XD, Maasalu K, Märtson A (2014). Human Genomics, 8 (1):20. DOI: 10.1186/s40246-014-0020-0.

  19. 2014 | Biology

    Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans.

    Raghavan M, Skoglund P, Graf KE, Metspalu M, Albrechtsen A, Moltke I, Rasmussen S, Stafford TW Jr, Orlando L, Metspalu E, et al (2014). Nature, 505 (7481):87-91. DOI: 10.1038/nature12736.

  1. 2013 | Biology

    No Evidence from Genome-Wide Data of a Khazar Origin for the Ashkenazi Jews.

    Behar DM, Metspalu M, Baran Y, Kopelman NM, Yunusbayev B, Gladstein A, Tzur S, Sahakyan H, Bahmanimehr A, Yepiskoposyan L, Tambets K, et al (2013). Human Biology, 85 (6):859-900. DOI: 10.3378/027.085.0604.

  2. 2013 | Biology

    The Andaman Islanders in a Regional Genetic Context: Reexamining the Evidence for an Early Peopling of the Archipelago from South Asia.

    Gyaneshwer, Chaubey; Phillip, Endicott (2013). Human Biology, 85 (1-3):153-72. DOI: 10.3378/027.085.0307.

  3. 2013 | Biology

    The Light Skin Allele of SLC24A5 in South Asians and Europeans Shares Identity by Descent.

    Basu Mallick C, Iliescu FM, Möls M, Hill S, Tamang R, Chaubey G, Goto R, Ho SY, Gallego Romero I, Crivellaro F, et al (2013). PLoS Genet 9 (11):e1003912. DOI: 10.1371/journal.pgen.1003912.

  4. 2013 | Chemistry

    Hydration Properties of Ligands and Drugs in Protein Binding Sites: Tightly-Bound, Bridging Water Molecules and Their Effects and Consequences on Molecular Design Strategies.

    Garcia-Sosa, Alfonso T (2013). Journal of Chemical Information and Modeling, 53 (6):1388-405. DOI: 10.1021/ci3005786.

  5. 2013 | Astronomy

    Evidence for spin alignment of spiral and elliptical/S0 galaxies in filaments.

    Tempel, E; Stoica, RS; Saar, E (2013). Monthly Notices of the Royal Astronomical Society, 428 (2):1827-1836. DOI: 10.1093/mnras/sts162.

  6. 2013 | Medical science

    Identification of seven loci affecting mean telomere length and their association with disease.

    Codd V, Nelson CP, Albrecht E, Mangino M, Deelen J, Buxton JL, Hottenga JJ, Fischer K, Esko T, et al (2013). Nature Genetics, 45 (4):422-427. DOI: 10.1038/ng.2528.

  7. 2013 | Physics

    First-principles calculations of structural and electronic properties of pure and Tm^2+ -doped SrCl2.

    Ma, C-G; Brik, MG (2013). Physica Status Solidi B, 250 (4):858–863. DOI: 10.1002/pssb.201200741.

  8. 2013 | Medical science

    Identification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.

    den Hoed M, Eijgelsheim M, Esko T, Brundel BJ, Peal DS, Evans DM, Nolte IM, Segre AV, Holm H, Handsaker RE, et al (2013). Nature Genetics, 45 (6):621-31. DOI: 10.1038/ng.2610.

  9. 2013 | Chemistry

    Kinetic sonication effects in light of molecular dynamics simulation of the reaction medium.

    Salmar S, Kuznetsov A, Tuulmets A, Järv J, Piiskop S (2013). Ultrasonics Sonochemistry, 20 (2):703-707. DOI: 10.1016/j.ultsonch.2012.10.010.

  10. 2013 | Chemistry

    Kinetic sonication effects in aqueous acetonitrile solutions. Reaction rate levelling by ultrasound.

    Piiskop S, Salmar S, Tuulmets A, Kuznetsov A, Järv J (2013). Ultrasonics Sonochemistry, 20 (6):1414–1418. DOI: 10.1016/j.ultsonch.2013.03.014.

  11. 2013 | Chemistry

    Relativistic Effects on Acidities and Basicities of Brønsted Acids and Bases Containing Gold.

    Koppel, Ilmar A; Burk, Peeter; Kasemets, Kalev; Koppel, Ivar (2013). Physical Chemistry Chemical Physics, 15 (41):17971-5. DOI: 10.1039/c3cp52435c.

  12. 2013 | Chemistry

    Choosing superbases for extending the experimental gas-phase basicity scale.

    Kaljurand, Ivari; Rodima, Toomas; Koppel, Ivar; Koppel, Ilmar A; Saame, Jaan; Leito, Ivo; Kögel, Julius; Sundermeyer, Jörg (2013). In: Book of Abstracts: 14th European Symposium on Organic Reactivity, Prague, Czech Republic.

  13. 2013 | Chemistry

    Additivity of substituent effects on the acidity of alcohols.

    Abboud, J-L; Koppel, IA; Koppel, I (2013). Journal of Physical Organic Chemistry, 26 (6):467-472. DOI: 10.1002/poc.3110.

  14. 2013 | Chemistry

    Acidities of strong neutral Brønsted acids in different media.

    Raamat, E; Kaupmees, K; Ovsjannikov, G; Trummal, A; Kütt, A; Saame, J; Koppel, I; Kaljurand, I; Lipping, L; Rodima, T; Pihl, V; Koppel IA; Leito, I (2013). Journal of Physical Organic Chemistry, 26 (2):162-170. DOI: 10.1002/poc.2946.

  15. 2013 | Chemistry

    The basicity of substituted N,N-dimethylanilines in solution and in the gas phase.

    Kaljurand, Ivari; Lilleorg, Roman; Murumaa, Algis; Mishima, Masaaki; Burk, Peeter; Koppel, Ivar; Koppel, Ilmar A; Leito, Ivo (2013). Journal of Physical Organic Chemistry, 26 (2):171-181. DOI: 10.1002/poc.2956.

  16. 2013 | Biology

    Effects Of Culture Conditions And Gene Transfection On The Development Of Bovine Somatic Cell Nuclear Transfer Embryos.

    Parn, Pille; Plaas, Mario; Nomm, Monika; Jaakma, Ulle; Kõks, Sulev (2013). In: Reproduction Fertility And Development: IETS, Hannover, Germany. Csiro Publishing.

  17. 2013 | Biology

    Veise embrüote kasvatamine laboris.

    Nõmm, Monika; Pärn, Pille; Kavak, Ants; Jaakma, Ülle; Kõks, Sulev (2013). Konverentsi “Terve loom ja tervislik toit 2013” kogumik. Tartu, Eesti Maaülikool.

  18. 2013 | Medical science

    Transcriptomic profiling of skin from Parkinson’s Disease patients.

    Planken, Anu; Kadastik-Eerme, Liis; Kurvits, Lille; Reimann, Ene; Kõks, Sulev; Taba, Pille (2013). XX World Congress on Parkinson’s Disease and Related Disorders; Geneva, Swizerland.

  19. 2013 | Medical science

    Transcriptome analysis of osteosarcoma identifies suppression of wnt pathway and up-regulation of adiponectin as potential biomarker.

    Märtson, Aare; Kõks, Sulev; Reimann, Ene; Prans, Ele; Erm, Triin; Maasalu, Katre (2013). Genomics Discovery, 1 (3). DOI: 10.7243/2052-7993-1-3.

  20. 2013 | Medical science

    Wfs1-deficient mice display altered function of serotonergic system and increased behavioural response to antidepressants.

    Visnapuu, T; Raud, S; Loomets, M; Reimets, R: Sütt, S; Luuk, H; Plaas, M; Kõks, S; Volke, V; Alttoa, A; Harro, J; Vasar, E (2013). Frontiers in Neuroscience, 7 (132):1-8. DOI: 10.3389/fnins.2013.00132.

  21. 2013 | Medical science

    The incidence-based and pathogen-based disability-adjusted life-years approach for measuring infectious disease burden in Europe: the Burden of Communicable Diseases in Europe (BCoDE) project.

    Plass, Dietrich; Mangen, Marie-Josée; Havelaar, Arie H; Gibbons, Cheryl; Haagsma, Juanita; Jahn, Beate; Lai, Taavi; van Lier, Alies; Longhi, Silvia; McDonald, Scott A; Kraemer, Alexander; Kramarz, Piotr; Cassini, Alessandro; Kretzschmar, Mirjam E (2013). The Lancet, 381, S114. DOI: 10.1016/S0140-6736(13)61368-9.

  22. 2013 | Medical science

    Fibroblast growth on micro- and nanopatterned surfaces prepared by a novel sol-gel phase separation method.

    Reemann, Paula; Kangur, Triin; Pook, Martin; Paalo, Madis; Nurmis, Liis; Kink, Ilmar; Porosaar, Orm; Kingo, Külli; Vasar, Eero; Kõks, Sulev; Jaks, Viljar; Järvekülg, Martin (2013). Journal of Materials Science: Materials in Medicine, 24 (3):783-92. DOI: 10.1007/s10856-012-4829-6.

  23. 2013 | Medical science

    Increased placental expression and maternal serum levels of apoptosis-inducing TRAIL in recurrent miscarriage.

    Rull, Kristiina; Tomberg, Kärt; Kõks, Sulev; Männik, Jaana; Möls, Märt; Sirotkina, Meeli; Värv, Signe; Laan, Maris (2013). Placenta, 34 (2):141-148. DOI: 10.1016/j.placenta.2012.11.032.

  24. 2013 | Medical science

    Peripheral blood RNA gene expression profiling in patients with bacterial meningitis.

    Lill, M; Kõks, S; Soomets, U; Schalkwyk, LC; Fernandes, C; Lutsar, I; Taba, P (2013). Frontiers in Neuroscience, 7 (33). DOI: 10.3389/fnins.2013.00033.

  25. 2013 | Medical science

    Evidence for impaired function of dopaminergic system in Wfs1-deficient mice.

    Visnapuu, T; Plaas, M; Reimets, R; Raud, S; Terasmaa, A; Kõks, S; Sütt, S; Luuk, H; Hundahl, CA; Eskla, K-L; Altpere, A; Alttoa, A; Harro, J; Vasar, E (2013). Behavioural Brain Research, 244:90-99. DOI: 10.1016/j.bbr.2013.01.046.

  26. 2013 | Medical science

    Silencing of the WFS1 gene in HEK cells induces pathways related to neurodegeneration and mitochondrial damage.

    Kõks, S; Overall, RW; Ivask, M; Soomets, U; Guha, M; Vasar, E; Fernandes, C; Schalkwyk, LC (2013). Physiological genomics, 45 (5):182-190. DOI: 10.1152/physiolgenomics.00122.2012.

  27. 2013 | Biology

    Gene Expression Analysis of the Corticotrophin-releasing Hormone-proopiomelanocortin System in Psoriasis Skin Biopsies.

    Loite, U; Kingo, K; Reimann, E; Reemann, P; Vasar, E; Silm, H; Kõks, S (2013). Acta Dermato-Venereologica, 93(4):400-5. DOI: 10.2340/00015555-1524.

  28. 2013 | Biology

    Metkatinoon ja mangaan vähendavad dopamiin-D2 retseptorite funktsiooni – in vivo SPECT uuring hiirtel.

    Asser, A; Raki, M; Juurmaa, J; Krispin, V; Muldmaa, M; Põldsepp, S; Rätsep, H; Männistö, P; Kõks, S; Bergström, K; Taba, P (2013). Eesti Arst, 91 (lisa 1):22-23.

  29. 2013 | Medical science

    Copy number variations in IL22 gene are associated with psoriasis vulgaris.

    Prans, Ele; Kingo, Külli; Traks, Tanel; Silm, Helgi; Vasar, Eero; Kõks, Sulev (2013). Human Immunology, 74 (6):792-5. DOI: 10.1016/j.humimm.2013.01.006.

  30. 2013 | Biology

    Lsamp(-/-) mice display lower sensitivity to amphetamine and have elevated 5-HT turnover.

    Innos, Jürgen; Leidmaa, Este; Philips, Mari-Anne; Sütt, Silva; Alttoa, Aet; Harro, Jaanus; Kõks, Sulev; Vasar, Eero (2013). Biochemical and Biophysical Research Communications, 430 (1):413-8. DOI: 10.1016/j.bbrc.2012.11.077.

  1. 2012 | Biology

    Empria formosana sp. n. from Taiwan with notes on E. wui species group (Hymenoptera, Tenthredinidae).

    Prous, Marko; Heidemaa, Mikk (2012). Deutsche Entomologische Zeitschrift, 59 (2):249-257. DOI: 10.1002/mmnd.201200021.

  2. 2012 | Chemistry

    DrugLogit: Logistic Discrimination between Drugs and Nondrugs Including Disease-Specificity by Assigning Probabilities Based on Molecular Properties.

    García-Sosa, Alfonso T; Oja, Mare; Hetenyi, Csaba; Maran, Uko (2012). J. Chem. Inf. Model, 52 (8):2165-2180. DOI: 10.1021/ci200587h.

  3. 2012 | Biology

    Phylogenetic and Functional Metagenomic Profiling for Assessing Microbial Biodiversity in Environmental Monitoring.

    Kisand V, Valente A, Lahm A, Tanet G, Lettieri T (2012). PLoS ONE, 7 (8):e43630. DOI: 10.1371/journal.pone.0043630.

  4. 2012 | Chemistry

    First-principles calculations of hydrostatic pressure effects on the structural, elastic and thermodynamic properties of cubic monocarbides XC (X = Ti, V, Cr, Nb, Mo, Hf).

    Krasnenko, V; Brik, MG (2012). Solid State Sciences, 14 (10): 1431-1444. DOI: 10.1016/j.solidstatesciences.2012.08.007.

  5. 2012 | Biology

    Genome-wide meta-analysis of common variant differences between men and women.

    Boraska V, Jeroncic A, Colonna V, Southam L, Nyholt DR, Rayner NW, Perry JR, Toniolo D, Albrecht E, Ang W, et al (2012). Hum. Mol. Genet, 21(21):4805-15. DOI: 10.1093/hmg/dds304.

  6. 2012 | Medical science

    Integration of genome-wide association studies with biological knowledge identifies six novel genes related to kidney function.

    Chasman DI, Fuchsberger C, Pattaro C, Teumer A, Böger CA, Endlich K, Olden M, Chen MH, Tin A, Taliun D, et al (2012). Hum. Mol. Genet, 21(24):5329-43. DOI: 10.1093/hmg/dds369.

  7. 2012 | Medical science

    Evidence of Inbreeding Depression on Human Height.

    McQuillan R, Eklund N, Pirastu N, Kuningas M, McEvoy BP, et al (2012). PLoS Genet, 8 (7):e1002655. DOI: 10.1371/journal.pgen.1002655.

  8. 2012 | Medical science

    Genome-Wide Association and Functional Follow-Up Reveals New Loci for Kidney Function.

    Pattaro C, Köttgen A, Teumer A, Garnaas M, Böger CA, Fuchsberger C, Olden M, Chen MH, Tin A, Taliun D, et al (2012). PLoS Genet, 8 (3):e1002584. DOI: 10.1371/journal.pgen.1002584.

  9. 2012 | Medical science

    Large-scale association analyses identify new loci influencing glycemic traits and provide insight into the underlying biological pathways.

    Scott RA, Lagou V, Welch RP, Wheeler E, Montasser ME, Luan J, Mägi R, Strawbridge RJ, Rehnberg E, Gustafsson S, et al (2012). Nature Genetics, 44 (9):991–1005. DOI: 10.1038/ng.2385.

  10. 2012 | Medical science

    Meta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways.

    Stolk L, Perry JR, Chasman DI, He C, Mangino M, Sulem P, Barbalic M, Broer L, Byrne EM, Ernst F, Esko T, et al (2012). Nature Genetics, 44 (3):260–268. DOI: 10.1038/ng.1051.

  11. 2012 | Medical science

    Large scale international replication and meta-analysis study confirms association of the 15q14 locus with myopia. The CREAM consortium.

    Verhoeven VJ, Hysi PG, Saw SM, Vitart V, Mirshahi A, Guggenheim JA, Cotch MF, Yamashiro K, Baird PN, et al (2012). Hum Genet, 131 (9):1467-80. DOI: 10.1007/s00439-012-1176-0.

  12. 2012 | Medical science

    FTO genotype is associated with phenotypic variability of body mass index.

    Yang J, Loos RJ, Powell JE, Medland SE, Speliotes EK, Chasman DI, Rose LM, Thorleifsson G, Steinthorsdottir V, Mägi R, Waite L, et al (2012). Nature, 490 (7419):267-72. DOI: 10.1038/nature11401.

  13. 2012 | Medical science

    Identification of new susceptibility loci for osteoarthritis (arcOGEN): a genome-wide association study.

    arcOGEN Consortium; arcOGEN Collaborators; Zeggini E, Panoutsopoulou K, Southam L, Rayner NW, Day-Williams AG, et al (2012). Lancet, 380 (9844):815-23. DOI: 10.1016/S0140-6736(12)60681-3.

  14. 2012 | Medical science

    Meta-analysis of genome-wide association studies for personality.

    de Moor MH, Costa PT, Terracciano A, Krueger RF, de Geus EJ, Toshiko T, Penninx BW, Esko T, Madden PA, Derringer J, et al (2012). Molecular Psychiatry, 17(3):337-49. DOI: 10.1038/mp.2010.128.

  15. 2012 | Medical science

    Meta-analysis of genome-wide association studies for personality.

    de Moor MH, Costa PT, Terracciano A, Krueger RF, de Geus EJ, Toshiko T, Penninx BW, Esko T, Madden PA, Derringer J, et al (2012). Mol Psychiatry, 17 (3):337-49. DOI: 10.1038/mp.2010.128.

  16. 2012 | Medical science

    Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes.

    Morris AP, Voight BF, Teslovich TM, Ferreira T, Segrè AV, Steinthorsdottir V, Strawbridge RJ, Khan H, et al (2012). Nature Genetics, 44 (9):981–990. DOI: 10.1038/ng.2383.

  17. 2012 | Biology

    m:Explorer – multinomial regression models reveal positive and negative regulators of longevity in yeast quiescence.

    Reimand, Jüri; Aun, Anu; Vilo, Jaak; Vaquerizas, Juan M; Sedman, Juhan; Luscombe, Nicholas M (2012). Genome Biology, 13 (6):R55. DOI: 10.1186/gb-2012-13-6-r55.

  18. 2012 | Physics

    Modification of the structural and electronic properties of graphene by the benzene molecule adsorption.

    Krasnenko, Veera; Kikas, Jaak; Brik, Mikhail G (2012). Physica B: Condensed Matter, 407 (23):4557-4561. DOI: 10.1016/j.physb.2012.08.019.

  19. 2012 | Astronomy

    SDSS DR7 superclusters. The catalogues.

    Liivamägi, LJ; Tempel, E; Saar, E (2012). Astronomy & Astrophysics, 539, A80. DOI: 10.1051/0004-6361/201016288.

  20. 2012 | Chemistry

    A New Class of Organosuperbases, N-Alkyl- and N-Aryl-1,3-dialkyl-4,5-dimethylimidazol-2-ylidene Amines: Synthesis, Structure, pK(BH+) Measurements, and Properties.

    Kunetskiy, RA; Polyakova, SM; Vavrik, J; Cisarova, I; Saame, J; Nerut, ER; Koppel, I; Koppel, IA; Kütt, A; Leito, I; Lyapkalo, IM (2012). Chemistry – A European Journal, 18(12):3621-30. DOI: 10.1002/chem.201102249.

  21. 2012 | Biology

    The Caucasus as an asymmetric semipermeable barrier to ancient human migrations.

    Yunusbayev B, Metspalu M, Järve M, Kutuev I, Rootsi S, Metspalu E, Behar DM, Varendi K, Sahakyan H, et al (2012). Mol Biol Evol, 29 (1):359-65. DOI: 10.1093/molbev/msr221.

  22. 2012 | Material science

    Molecular Dynamics simulations of EMI-BF4 in nanoporous carbon actuators.

    Soolo, Endel; Brandell, Daniel; Liivat, Anti; Kasemägi, Heiki; Tamm, Tarmo; Aabloo, Alvo (2012). Journal of Molecular Modeling, 18 (4):1541-52. DOI: 10.1007/s00894-011-1182-5.

  1. 2011 | Biology

    Shared and Unique Components of Human Population Structure and Genome-Wide Signals of Positive Selection in South Asia.

    Metspalu M, Romero IG, Yunusbayev B, Chaubey G, Mallick CB, Hudjashov G, Nelis M, Mägi R, et al (2011). The American Journal of Human Genetics, 89 (6):731-44. DOI: 10.1016/j.ajhg.2011.11.010.

  2. 2011 | Medical science

    Neuroglobin-Deficiency Exacerbates Hif1A and c-FOS Response, but Does Not Affect Neuronal Survival during Severe Hypoxia In Vivo.

    Hundahl CA, Luuk H, Ilmjärv S, Falktoft B, Raida Z, Vikesaa J, Friis-Hansen L, Hay-Schmidt A (2011). PLoS ONE, 6 (12):e28160. DOI: 10.1371/journal.pone.0028160.

  3. 2011 | Biology

    Elurikkuse informaatika.

    Kõljalg, Urmas; Abarenkov, Kessy. Teadusmõte Eestis (VI). Elu ja Maateadused. Eesti Teaduste Akadeemia. Tallinn 2011.

  4. 2011 | Material science

    Branched polyethylene/poly(ethylene oxide) as a host matrix for Li-ion battery electrolytes: an MD study.

    Brandell, Daniel; Priimägi, Priit; Kasemägi, Heiki; Aabloo, Alvo (2011). Electrochimica Acta, 57:228-236. DOI: 10.1016/j.electacta.2011.03.022.

  5. 2011 | Material science

    Modelling Polymer Electrolytes for 3D-Microbatteries using Finite Element Analysis.

    Zadin, Vahur; Brandell, Daniel (2011). Electrochimica Acta, 57:237-243. DOI: 10.1016/j.electacta.2011.03.026.

  6. 2011 | Material science

    Finite element modelling of ion transport in the electrolyte of a 3D-microbattery.

    Zadin, Vahur; Kasemägi, Heiki; Aabloo, Alvo; Thomas, John O; Brandell Daniel (2011). Solid State Ionics, 192 (1):279-283. DOI: 10.1016/j.ssi.2010.02.007.

  7. 2011 | Biology

    Population Genetic Structure in Indian Austroasiatic Speakers: The Role of Landscape Barriers and Sex-Specific Admixture.

    Chaubey G, Metspalu M, Choi Y, Mägi R, Romero IG, Soares P, van Oven M, Behar DM, Rootsi S, et al (2011). Mol Biol Evol, 28 (2):1013-1024. DOI: 10.1093/molbev/msq288.

  8. 2011 | Chemistry

    Combined Approach using Ligand Efficiency, Cross-Docking, and Anti-Target Hits for Wild-Type and Drug-Resistant Y181C HIV-1 Reverse Transcriptase.

    García-Sosa, Alfonso T; Sild, Sulev; Takkis, Kalev; Maran Uko (2011). Journal of Chemical Information and Modeling, 51 (10):2595-2611. DOI: 10.1021/ci200203h.

  9. 2011 | Medical science

    Genome-wide association analysis identifies variants associated with nonalcoholic fatty liver disease that have distinct effects on metabolic traits.

    Speliotes EK, Yerges-Armstrong LM, Wu J, Hernaez R, Kim LJ, Palmer CD, Gudnason V, Eiriksdottir G, et al (2011). PLoS Genet, 7 (3):e1001324. doi: 10.1371/journal.pgen.1001324.

  10. 2011 | Medical science

    Genome-wide association and genetic functional studies identify autism susceptibility candidate 2 gene (AUTS2) in the regulation of alcohol consumption.

    Schumann G, Coin LJ, Lourdusamy A, Charoen P, Berger KH, Stacey D, Desrivières S, Aliev FA, Khan AA, Amin N, et al (2011). Proc Natl Acad Sci USA, 108 (17):7119-24. DOI: 10.1073/pnas.

  11. 2011 | Medical science

    A Variant in MCF2L Is Associated with Osteoarthritis.

    Day-Williams AG, Southam L, Panoutsopoulou K, Rayner NW, Esko T, Estrada K, Helgadottir HT, Hofman A, Ingvarsson T, et al (2011). Am J Hum Genet, 89 (3):446-50. DOI: 10.1016/j.ajhg.2011.08.001.

  12. 2011 | Medical science

    Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk.

    International Consortium for Blood Pressure Genome-Wide Association Studies; Ehret GB, Munroe PB, Rice KM, Bochud M, et al (2011). Nature, 478 (7367):103-9. DOI: 10.1038/nature10405.

  13. 2011 | Medical science

    Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure.

    Wain LV, Verwoert GC, O’Reilly PF, Shi G, Johnson T, Johnson AD, Bochud M, Rice KM, Henneman P, Smith AV, et al (2011). Nat Genet, 43 (10):1005-11. DOI: 10.1038/ng.922.

  14. 2011 | Astronomy

    The cosmic web for density perturbations of various scales.

    Suhhonenko, I; Einasto, J; Liivamägi, LJ; Saar, E; Einasto, M; Hütsi, G; Müller, V; Starobinsky, AA; Tago, E; Tempel, E (2011). Astronomy & Astrophysics, 531, A149. DOI: 10.1051/0004-6361/201016394.

  15. 2011 | Astronomy

    Wavelet analysis of the cosmic web formation.

    Einasto, J; Hütsi, G; Saar, E; Suhhonenko, I; Liivamägi, LJ; Einasto, M; Müller, V; Starobinsky, AA; Tago, E; Tempel, E (2011). Astronomy & Astrophysics, 531, A75. DOI: 10.1051/0004-6361/201016070.

  16. 2011 | Astronomy

    Towards understanding the structure of voids in the cosmic web.

    Einasto, J; Suhhonenko, I; Hütsi, G; Saar, E; Einasto, M; Liivamägi, LJ; Müller, V; Starobinsky, AA; Tago, E; Tempel, E (2011). Astronomy & Astrophysics, 2011, 534, A128. DOI: 10.1051/0004-6361/201117248.

  17. 2011 | Chemistry

    Equilibrium acidities of superacids.

    Kütt A, Rodima T, Saame J, Raamat E, Mäemets V, Kaljurand I, Koppel IA, Garlyauskayte RY, Yagupolskii YL, Yagupolskii LM, Bernhardt E, Willner H, Leito I (2011). J Org Chem. 76 (2):391-5. DOI: 10.1021/jo101409p.

  18. 2011 | Chemistry

    Acidity of Anilines: Calculations vs Experiment.

    Lipping, Lauri; Kütt, Agnes; Kaupmees, Karl; Koppel, Ivar; Burk, Peeter; Leito, Ivo; Koppel, Ilmar A (2011). Journal of Physical Chemistry A, 115 (37):10335-44. DOI: 10.1021/jp204064q.

  19. 2011 | Chemistry

    Calculations of pKa of Superacids in 1,2-Dichloroethane.

    Trummal, A; Rummel, A; Lippmaa, E; Koppel, I; Koppel, IA (2011). Journal of Physical Chemistry A, 115 (24):6641-5. DOI: 10.1021/jp202434p.

  1. 2010 | Chemistry

    Polytrifluoromethylation versus Polyfluorination of the Isomers of Kekule Benzene and Phenol: A Theoretical Study.

    Lipping, Lauri; Koppel, Ivar; Koppel, Ilmar A; Kolomeitsev, Alexander; Röschenthaler, Gerd-Volker; Leito, Ivo (2010). Journal of Organic Chemistry, 75 (19):6436-6444. DOI: 10.1021/jo101061u.

  2. 2010 | Medical science

    Insights into the genetic architecture of osteoarthritis from stage 1 of the arcOGEN study.

    Panoutsopoulou K, Southam L, Elliott KS, Wrayner N, Zhai G, Beazley C, Thorleifsson G, Arden NK, Carr A, et al (2010). Ann Rheum Dis, 70 (5):864-7. DOI: 10.1136/ard.2010.141473.

  3. 2010 | Material science

    Self-sensing ionic polymer-metal composite actuating device with patterned surface electrodes.

    Kruusamäe, Karl; Brunetto, Paola; Graziani, Salvatore; Punning, Andres; Di Pasquale, Giovanna; Aabloo, Alvo (2010). Polymer International, 59 (3):300-304. DOI: 10.1002/pi.2752.

  4. 2010 | Material science

    Ionic polymer-metal composite mechanoelectrical transduction: review and perspectives.

    Pugal, David; Jung, Kwangmok; Aabloo, Alvo; Kim, Kwang (2010). Polymer International, 59 (3):279-289. DOI: 10.1002/pi.2759.

  5. 2010 | Chemistry

    Poly(ethylene oxide)-poly(butadiene) interpenetrated networks as electroactive polymers for actuators: a molecular dynamics study.

    Brandell, Daniel; Kasemägi, Heiki; Aabloo, Alvo (2010). Electrochimica Acta, 55 (4):1333-1337. DOI: 10.1016/j.electacta.2009.04.070.

  6. 2010 | Chemistry

    Force Field Generation and Molecular Dynamics Simulations of Li+ – Nafion.

    Soolo, E; Brandell, D; Liivat, A; Tamm, T; Kasemägi, A; Aabloo, A (2010). Electrochimica Acta, 55 (4):2587-2591. DOI: 10.1016/j.electacta.2009.03.039.

  7. 2010 | Material science

    Finite element modelling of ion transport in the electrolyte of a 3D-microbattery.

    Zadin, Vahur; Kasemägi, Heiki; Aabloo, Alvo; Thomas, Josh; Brandell, Daniel (2010). Solid State Ionics, 192 (1):279-283. DOI: 10.1016/j.ssi.2010.02.007.

  8. 2010 | Materal science

    Modelling electrode material utilization in the trench-model 3D-microbattery by finite element analysis.

    Zadin, Vahur; Kasemägi, Heiki; Aabloo, Alvo; Brandell, Daniel (2010). Journal of Power Sources, 195 (18):6218-6224. DOI: 10.1016/j.jpowsour.2010.02.056.

  9. 2010 | Material science

    Modelling the Nafion (R) diffraction profile by molecular dynamics simulation.

    Brandell, Daniel; Karo, Jaanus; Thomas, John O (2010). Journal of Power Sources, 195 (18):5962-5965. DOI: 10.1016/j.jpowsour.2009.12.057.

  10. 2010 | Chemistry

    Molecular Dynamics Modeling of Proton Transport in Nafion and Hyflon Nanostructures.

    Karo, Jaanus; Aabloo, Alvo; Thomas, John O; Brandell, Daniel (2010). Journal of Chemical Physics B, 114 (18):6056–6064. DOI: 10.1021/jp903288y.

  11. 2010 | Medical science

    Thirty new loci for age at menarche identified by a meta-analysis of genome-wide association studies.

    Elks CE, Perry JR, Sulem P, Chasman DI, Franceschini N, He C, Lunetta KL, Visser JA, Byrne EM, Cousminer DL, Gudbjartsson DF et al (2010). Nature Genetics, 42 (12):1077–1085. DOI: 10.1038/ng.714.

  12. 2010 | Medical science

    Hundreds of variants clustered in genomic loci and biological pathways affect human height.

    Lango Allen H, Estrada K, Lettre G, Berndt SI, Weedon MN, Rivadeneira F, Willer CJ, Jackson AU, Vedantam S, Raychaudhuri S, Ferreira T, Wood AR, et al (2010). Nature, 467 (7317):832–838. DOI: 10.1038/nature09410.

  13. 2010 | Medical science

    Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution.

    Heid IM, Jackson AU, Randall JC, Winkler TW, Qi L, Steinthorsdottir V, Thorleifsson G, Zillikens MC, Speliotes EK, Mägi R, Workalemahu T, et al (2010). Nature Genetics, 42 (11):949-60. DOI: 10.1038/ng.685.

  14. 2010 | Medical science

    Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index.

    Speliotes EK, Willer CJ, Berndt SI, Monda KL, Thorleifsson G, Jackson AU, Lango Allen H, Lindgren CM, Luan J, Mägi R, et al (2010). Nature Genetics, 42 (11):937-48. DOI: 10.1038/ng.686.

  15. 2010 | Chemistry

    Free Energy Calculations of Mutations Involving a Tightly Bound Water Molecule and Ligand Substitutions in a Ligand-Protein Complex.

    Garcia-Sosa, Alfonso T; Mancera, Ricardo L (2010). Molecular Informatics, 29 (8-9):589-600. DOI: 10.1002/minf.201000007.

  16. 2010 | Biology

    The genome-wide structure of the Jewish people.

    Behar DM, Yunusbayev B, Metspalu M, Metspalu E, Rosset S, Parik J, Rootsi S, Chaubey G, Kutuev I, et al (2010). Nature, 466 (7303):238-242. DOI: 10.1038/nature09103.

  17. 2010 | Biology

    Ancient human genome sequence of an extinct Palaeo-Eskimo.

    Rasmussen M, Li Y, Lindgreen S, Pedersen JS, Albrechtsen A, Moltke I, Metspalu M, Metspalu E, Kivisild T, et al (2010). Nature, 463 (7282):757-762. DOI: 10.1038/nature08835.

  18. 2010 | Medical science

    A new highly penetrant form of obesity due to deletions on chromosome 16p11.2.

    Walters RG, Jacquemont S, Valsesia A, de Smith AJ, Martinet D, Andersson J, Falchi M, Chen F, Andrieux J, et al (2010). Nature, 463 (7281):671-675. DOI: 10.1038/nature08727.

  19. 2010 | Astronomy

    Dust-corrected surface photometry of M31 from Spitzer far-infrared observations.

    Tempel, E; Tamm, A; Tenjes, P (2010). Astronomy & Astrophysics, 509, A91. DOI: 10.1051/0004-6361/200912186.

  20. 2010 | Biology

    PlutoF - a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences.

    Abarenkov K, Tedersoo L, Nilsson RH, et al (2010). Evolutionary Bioinformatics, 6:189-196. DOI: 10.4137/EBO.S6271.

  21. 2010 | Chemistry

    Poly(ethylene oxide)-poly(butadiene) interpenetrated networks as electroactive polymers for actuators: a molecular dynamics study.

    Brandell, Daniel; Kasemägi, Heiki; Aabloo, Alvo (2010). Electrochimica Acta, 55 (4). DOI: 10.1016/j.electacta.2009.04.070.

  22. 2010 | Chemistry

    Force Field Generation and Molecular Dynamics Simulations of Li+ – Nafion.

    Soolo, Endel; Brandell, Daniel; Liivat, Anti; Tamm, Tamm; Kasemägi, Heiki; Aabloo, Alvo (2010). Electrochimica Acta, 55 (8). DOI: 10.1016/j.electacta.2009.03.039.

  1. 2009 | Biology

    Genetic Structure of Europeans: A View from the North-East.

    Nelis, Mari; Esko, Tõnu; Mägi, Reedik; Zimprich, Fritz, Zimprich, Alexander, et al (2009). PLoS ONE 4(5): e5472. doi:10.1371/journal.pone.0005472.

  2. 2009 | Chemistry

    A Distributed Model of Ionomeric Polymer Metal Composite.

    Punning, Andres; Johanson, Urmas; Anton, Mart; Aabloo, Alvo; Kruusmaa, Maarja (2009). Journal of Intelligent Material Systems and Structures, 20 (14). DOI: 10.1177/1045389X09337170.

  3. 2009 | Material science

    Dynamic surface resistance model of IPMC.

    Pugal, David; Aabloo, Alvo; Kim, Kwang J (2009). Proc. SPIE, 7289, 72891E. DOI: 10.1117/12.815824.

  4. 2009 | Chemistry

    A Molecular dynamics study of the influence of side-chain length and spacing on lithium mobility in non-crystalline LiPF6-PEO; x10 and 30.

    Karo, Jaanus; Brandell, Daniel (2009). Solid State Ionics, 180 (23-25). DOI: 10.1016/j.ssi.2009.07.009.

  5. 2009 | Chemistry

    Importance of the initial stage: a comparative study of the development of polypyrrole properties.

    Tamm, Tarmo; Raudsepp, Terje; Visk, U; Marandi, Margus; Tamm, Jüri (2009). 60th Annual Meeting of the International Society of Electrochemistry, Peking, China, 16-21 aug. 2009.

  6. 2009 | Chemistry

    QSAR study of pharmacological permeabilities.

    Karelson, Mati; Karelson, Gunnar; Tamm, Tarmo; Tulp, Indrek; Jänes, Jaak; Tämm, Kaido; Lomaka, Andre; Savchenko, Deniss; Dobchev, Dinitar (2009). Arkivoc (ii), 218-238.

  7. 2009 | Chemistry

    Overoxidation of Polypyrrole, Role of Dopants: An Electrochemical, Theoretical, and FTIR Study.

    Tamm, Tarmo; Visk, U; Raudsepp, Terje (2009). In: International workshop on electrochemistry of electroactive materials, Szczyrk, Poland.

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UTHPC cluster Rocket, its file systems, and the cluster cooling system will undergo scheduled maintenance (will not be available) during the period of January 12-18, 2026. Read more »